Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04140 ATGGGTCGTAGAAAAGTAAAGATGGAGTATGTGAAAGACAAGGATAAGAGAGTTGCAGTGGTTGGATTCACCCCTGGTGGTAAACCATTTGCTTTTGGTTCTCCATCTTTTCAATCTGTGAGTGGTGAGTACCTTCATGAAGTACAAGGTGAATCATCAAACCAAAATGTTGAGAATTATGAAAATGGAAATCTCAACATTCTGAATGAACAACTTAATGATGTGACCAAAGAGCTGAAGGAGATGAAAACTAAAAAGGACAAAAATGGTAAAGTCCCTAATATTTCCCTTGATGATCTTACTTTAGAGGAGCTTCAAAATGTCAAGGCTAAATTGAAAGAGCTCCATGGTGACATTGAGGCAGCATCATCTATGCTTCTCCTTGCAAAGGAACCTAGATGA 402 0.3831 MGRRKVKMEYVKDKDKRVAVVGFTPGGKPFAFGSPSFQSVSGEYLHEVQGESSNQNVENYENGNLNILNEQLNDVTKELKEMKTKKDKNGKVPNISLDDLTLEELQNVKAKLKELHGDIEAASSMLLLAKEPR 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04140 133 Coils Coil 65 85 - -
Trre8g04140 133 Coils Coil 102 125 - -
Trre8g04140 133 SUPERFAMILY SRF-like 2 59 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04140 Trre-Chr8 46111378 46111854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04140 1 130 Type I MADS-box Gene Family AT2G34440 29.651 6.11e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04140 - - mtr:25493407 119.783