Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04112 ATGTTTTGTGAAAAACAATTTTCTACAAATCCTAATCTAGGTTCATCTTATGATAGTTTTGATCCATCATCTTATAATATGAGTTTCACAGAATGTTTACAAGGAGGAAACATGGATCATCACTACAATTCATCATCACTCGCGAATAATTCTCCTTTTGGAGTATTATCTCCTTCATCATCAGAAGTTTTTTCATCTGTTGATCAAGGAAATAATCAAAAACAAGAAGTAGTTGGTGGCGAAACCCTTCTTAACTCATCTATCTCTAATTCATCGTCTTCTGAAGCCGGAGGAGGAGGAGGAGCAGAAGAAGAAGATTCCGGCAAGAAAAAGAAAAATATTGGACAAGTTAAAGAAGAACCAGGACAAGAAGCCACTAAAAATGGGAACAACAAGGTGGAGAAGAAGAAAGGAGAGAAGAAACAAAAGGAACCAAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCAACTTGAAGATGGATATAGATGGAGAAAATATGGACAAAAAGCTGTCAAAAATAGTCCATACCCTAGGAGCTATTACAGGTGTACAACACAGAAATGCACAGTGAAAAAACGCGTAGAAAGATCATATGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCCTGTCCCCACTTCTCTTAGAGGCAATGCGGCTTCAATGTTCACACCTTCTCATTTGCTATCTACACCCACCCCTTTTACTTCATCCGGGTCAAACTATAATTTTCCTCAAGAACTGCTTCTCCATATGCACCACAACAACAATAATACCTTCAATAATCAATCAACAACATATGCTACTAGTAATGCTTCCATTTATTCATCATCACACAATAATATTAACAACTCTCTTCTTCAACAATATCAACATCAAGTACTTCCTAATCATGATCAATATGGACTCCTTCAAGATATTGTCCCTTCCATGTTCCTTAATAGGACCAACCATAACTAA 978 0.365 MFCEKQFSTNPNLGSSYDSFDPSSYNMSFTECLQGGNMDHHYNSSSLANNSPFGVLSPSSSEVFSSVDQGNNQKQEVVGGETLLNSSISNSSSSEAGGGGGAEEEDSGKKKKNIGQVKEEPGQEATKNGNNKVEKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAASMFTPSHLLSTPTPFTSSGSNYNFPQELLLHMHHNNNNTFNNQSTTYATSNASIYSSSHNNINNSLLQQYQHQVLPNHDQYGLLQDIVPSMFLNRTNHN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04112 325 FunFam WRKY transcription factor 57 144 218 - -
Trre8g04112 325 SUPERFAMILY WRKY DNA-binding domain 150 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g04112 325 SMART WRKY_cls 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g04112 325 MobiDBLite consensus disorder prediction 129 146 - -
Trre8g04112 325 ProSiteProfiles WRKY domain profile. 153 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g04112 325 MobiDBLite consensus disorder prediction 102 118 - -
Trre8g04112 325 MobiDBLite consensus disorder prediction 85 146 - -
Trre8g04112 325 Pfam WRKY DNA -binding domain 159 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g04112 325 Gene3D WRKY domain 142 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g04112 325 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 50 270 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04112 Trre-Chr8 45947545 45949189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04112 16 319 WRKY Transcription Factor Family AT4G18170 48.232 4.79e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre8g04112 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04112 - - cam:101497541 328.561