Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04095 ATGAAGGCTCACTCTAACTTGCATAAGAGAAATTCTACCTTAATTGCTGATAGGAATCATGCTGCGTTTAAGAAGACATCAAGGAAGGGAAGCTATGTAGACACTCTTGAACAAAAGCAGACAGGAAATATATTTACTAGAGAAGAAAAATACAACGAGGATGAGGATAACAATGACGCCGATGATAACAACAGTGAAGAAAAATCTGGAGATGATGATGTGGTTGATGATCAACAAGAGGAAGGAGAGTACTTACTAGGCGACGAGGGTCCTCCTACAGTTACAAAGGATGGAATTCACAAAGGTCTGTTCACGAAAGAAGCGGATGAAGAAAATAATACTGCTACTCGACATTTCAGCCATGGATGTCACTTAATGGAAGGAGAGATGAACCATGGAATGGAGGACTATGTTTTTGCTCAACACAGGAAGCTCAATGGTTACGACTTAGGACTCTACGCAATATTCGATGGACACGCAGGTCGCGATGTTGCAAAATATTTGCAAAGCCATCTATTTGAAAATATACTTAGTGAGCCTGATTTCTGGGAAAATCCAGTGCACGCTGTTAAGAAAGCATGTAAAGCTATGGATGATGAGATTCTAGAAAACATAGCCAATTCGCACGGAGGATCAACGGCTGTGGCAGCAATACTAATTAATGGAGTAAAGCTACTGGTAATCAATGTTGGTGATTCTCGAGCAATATCGTGTAAAAAAGGGATTGCAAAACAACTTACCGTAGATCACGAACCAGAGAAGGAAAAGGATCTGGTTGAGAGCAGAGGGGGTTTTGTGATTAAGAGACCTGGGAATGTTCCAAGAGTGGATGACCAGTTAGCAATGACAAGAGCATTTGGAGATGGAAAACTGAAGGAGCACATCACTGCAGAACCAGATGTAATGATTAAGAAGATCGATGAGGACACTGAATTCATCATTTTGGCAAGTGATGGTCTTTGGAAGGTGATGACAAATCAAGAGGCTTGTGACTGTATCAAGGATGTTGATGATGCTCAAAAAGCAGCAAAAAAGTTAGTGGCAGAAGCAAAATACAGGGGAAGCTATGATGATATTTCATGCTTAGTTTTTATGTTCTAG 1101 0.406 MKAHSNLHKRNSTLIADRNHAAFKKTSRKGSYVDTLEQKQTGNIFTREEKYNEDEDNNDADDNNSEEKSGDDDVVDDQQEEGEYLLGDEGPPTVTKDGIHKGLFTKEADEENNTATRHFSHGCHLMEGEMNHGMEDYVFAQHRKLNGYDLGLYAIFDGHAGRDVAKYLQSHLFENILSEPDFWENPVHAVKKACKAMDDEILENIANSHGGSTAVAAILINGVKLLVINVGDSRAISCKKGIAKQLTVDHEPEKEKDLVESRGGFVIKRPGNVPRVDDQLAMTRAFGDGKLKEHITAEPDVMIKKIDEDTEFIILASDGLWKVMTNQEACDCIKDVDDAQKAAKKLVAEAKYRGSYDDISCLVFMF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04095 366 SUPERFAMILY PP2C-like 116 366 IPR036457 -
Trre8g04095 366 MobiDBLite consensus disorder prediction 54 76 - -
Trre8g04095 366 ProSiteProfiles PPM-type phosphatase domain profile. 120 366 IPR001932 -
Trre8g04095 366 FunFam Probable protein phosphatase 2C 39 112 366 - -
Trre8g04095 366 ProSitePatterns PPM-type phosphatase domain signature. 152 160 IPR000222 GO:0043169
Trre8g04095 366 Gene3D - 115 366 IPR036457 -
Trre8g04095 366 CDD PP2Cc 119 363 IPR001932 -
Trre8g04095 366 PANTHER PROTEIN PHOSPHATASE 69 364 IPR015655 GO:0004722|GO:0006470
Trre8g04095 366 MobiDBLite consensus disorder prediction 1 76 - -
Trre8g04095 366 SMART PP2C_4 110 364 IPR001932 -
Trre8g04095 366 Pfam Protein phosphatase 2C 132 359 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04095 Trre-Chr8 45768826 45772201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04095 117 366 PP2C-type Phosphatase Gene Family AT4G28400 56.175 8.60e-99 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04095 - - gmx:100814772 531.946