Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04069 ATGGGGAGAGAAGAAGAAGAAGAAGAAGAATTCAAAAAGATGGAAATTAATCTCTCTTTGAAGATAGATAGTGATGATGATGATGATGATGATGAACAAGGAGATGAAGTAGAAGAAATAGAAGATCATGATCAAGTGAAAGAGGATGAGAAGGAAGAAGTTCATGAAGCTACAACTGGTGAAATTGAAGATGATTCATCGGTGATTCAACTATCTTTGCAAGATAACCCCAAAACAAAAGAGTTAAGTGCCTTAGAAATGGAGATGGAGAGTATGAAAGAAGAAAACAAAGTTTTAAGGAAAGTGGTGGAACAAACAATGAAAGATTATTATGATCTACAAACCAAATTTTCAGTCATCCAAGAAAATAATAATAAAAGAAAGGATCATACACTTTCTCTCTCACTACAAGACAATAATGCATCAACAAGTGGTGAAGGACCATCAAGATTAATTCATGAGATCTTTAGTAAAAATATTGAAAGAACTCCATCTCCATTACCACAAAACAATATTGACCATGATAGTATAAGTGAGAGTGATTTGGGTTTATCACTAAGGTTGCAAACAAGCACAAGTCAGAAAGATAATCTTGAAGAAAATAAAGAAGCTGGCAAAAGAGAACAATTGGCAAGTTTTGAAACAGTGCAGAATAAATTTCAGAGAGTACAACATGACTTGCCAGCTGGTATTACTACTCATGCAGCTGCTTATTCCCCTCCTAATAGAAAGGCTAGGGTTTCTGTTAGAGCTAGATGTGAAACTGCCACAATGAATGATGGATGTCAATGGAGAAAATATGGACAAAAAATTGCAAAAGGAAATCCATGTCCACGAGCTTATTATCGTTGCACCGTAGCTACAGGTTGTCCCGTTAGAAAACAGGTGCAAAGATGTATAGATGACATGTCTATACTAATTACAACATATGAAGGAACACATAACCATCCACTACCTGTTGGTGCAACTGCTATGGCATCAACAGCATCAGCAGCAACTTCATTTATGTTACTAGATTCAAGCAACCCTAATTCAGATTATGGTTACACAAGCCAACAAACCTTTAATAATCCTTACATTAATAATACCTTCCACCACCCATTAAACCAATCTTCAAATATTAGAAACATAAACCCTAATGATCCATCACAAGGGATTGTTCTTGACCTCACCAATAACAATAATCTCCACGAACCACGACGTTTTTCGACCGCAGGTAGCTCTAGCTCGACTTCAACCGATCAACATCGTTTTTCTTGGATGCAAAACAAATTCAATCAACAAAGTAGTACTAGTAGTAGTGCTAATATTGCAATGAATAATTTTTATAAACCATTGGAAATTCATGATAGAAGTTGGAAAGGTGATCAAGAAAGTAATAATAGCAACAACAATAATGTGTCTGCAATTGCATCAGATCCTAAATTTAGGCTTGCTGTTGCAGCTGCAATTTCATCACTCATGAATAAAGAAAGCAACAACAATACTACTACTCATGGTAGCAACAATTGA 1512 0.3552 MGREEEEEEEFKKMEINLSLKIDSDDDDDDDEQGDEVEEIEDHDQVKEDEKEEVHEATTGEIEDDSSVIQLSLQDNPKTKELSALEMEMESMKEENKVLRKVVEQTMKDYYDLQTKFSVIQENNNKRKDHTLSLSLQDNNASTSGEGPSRLIHEIFSKNIERTPSPLPQNNIDHDSISESDLGLSLRLQTSTSQKDNLEENKEAGKREQLASFETVQNKFQRVQHDLPAGITTHAAAYSPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVATGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAATSFMLLDSSNPNSDYGYTSQQTFNNPYINNTFHHPLNQSSNIRNINPNDPSQGIVLDLTNNNNLHEPRRFSTAGSSSSTSTDQHRFSWMQNKFNQQSSTSSSANIAMNNFYKPLEIHDRSWKGDQESNNSNNNNVSAIASDPKFRLAVAAAISSLMNKESNNNTTTHGSNN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04069 503 MobiDBLite consensus disorder prediction 47 62 - -
Trre8g04069 503 MobiDBLite consensus disorder prediction 22 46 - -
Trre8g04069 503 MobiDBLite consensus disorder prediction 366 386 - -
Trre8g04069 503 FunFam probable WRKY transcription factor 31 243 320 - -
Trre8g04069 503 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 54 495 IPR044810 GO:0003700
Trre8g04069 503 Pfam WRKY DNA -binding domain 259 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g04069 503 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g04069 503 SUPERFAMILY WRKY DNA-binding domain 251 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g04069 503 Coils Coil 188 208 - -
Trre8g04069 503 Coils Coil 82 109 - -
Trre8g04069 503 MobiDBLite consensus disorder prediction 17 64 - -
Trre8g04069 503 Gene3D WRKY domain 243 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g04069 503 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04069 Trre-Chr8 45458597 45461229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04069 26 385 WRKY Transcription Factor Family AT1G68150 46.341 5.95e-85 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre8g04069 WRKY 3.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04069 - - gmx:100820209 552.362