Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04062 ATGGCGTCGTCGAAGGTTGTTGTTGTTGTTTCAACAAATCCGGATCTGCCACGTGCCCCTTCTATATCATCTTCTTCTTTTCTTTTTTCTTCTCATTTTCATCATCTACCTTCAAAAAACACCACCACCATGGATGAAATTCTCAAAAATATTTACCCTGCTGCAATAGAAGCCGCTTCGAAACAACAACAACAATCCACCACCACCACCAATAACAACATTGACGATGTCTGGAAGGACATCGTCGCAGGTGGTGGCACAAACCATCACGATCATCAATATCAATATCAATATCATCCTTCTTCTGATGAAGGTTTCTCCACCTATAGTCCAGGTGGTGATGAAGTTACTCTTGAAGATTTTTTGGTGAGAGCTGGTGCTGTTCCTGCTCCTTTCTCTCCTCATCAATATCCTTCTTCTTCTGACGCTTCAAATTCTCTTGCATTTGCAACTGTTAAACGTAAAGCTGTTGAGGAAAAGCTTGAACTTGATAAAGCTACTCTTCAGAAACAGAAAAGAATGATCAAGAATCGTGAGTCCGCCGCTAGGTCCAGAGAACGCAAACAGGCTTATACTACTGAGCTTGAGAGCCGTGTTAATCGTCTGCAAACAGAGAATCAGCTGTTATTGGAAGAACAGGCTGAGAGGGAAAAGCAGAGGCTAAAAGATCTCAAAGAGATAGTGATTCCAATCACGGAGGAGCGTAGACCAAAACGGAAACTGCGAAGATTAAATTCATTTTAA 744 0.418 MASSKVVVVVSTNPDLPRAPSISSSSFLFSSHFHHLPSKNTTTMDEILKNIYPAAIEAASKQQQQSTTTTNNNIDDVWKDIVAGGGTNHHDHQYQYQYHPSSDEGFSTYSPGGDEVTLEDFLVRAGAVPAPFSPHQYPSSSDASNSLAFATVKRKAVEEKLELDKATLQKQKRMIKNRESAARSRERKQAYTTELESRVNRLQTENQLLLEEQAEREKQRLKDLKEIVIPITEERRPKRKLRRLNSF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04062 247 Coils Coil 192 227 - -
Trre8g04062 247 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 167 219 IPR004827 GO:0003700|GO:0006355
Trre8g04062 247 CDD bZIP_plant_BZIP46 169 215 - -
Trre8g04062 247 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 167 228 - -
Trre8g04062 247 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 172 187 IPR004827 GO:0003700|GO:0006355
Trre8g04062 247 Coils Coil 158 178 - -
Trre8g04062 247 SUPERFAMILY Leucine zipper domain 169 219 IPR046347 GO:0003700|GO:0006355
Trre8g04062 247 SMART brlzneu 165 227 IPR004827 GO:0003700|GO:0006355
Trre8g04062 247 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 28 219 IPR043452 GO:0003700|GO:0045893
Trre8g04062 247 Gene3D - 168 228 - -
Trre8g04062 247 Pfam bZIP transcription factor 166 221 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04062 Trre-Chr8 45391062 45399639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04062 52 247 bZIP Transcription Factor Family AT1G03970 34.091 5.05e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre8g04062 bZIP_1 2.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04062 K14432 - fve:101301305 151.369