Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04055 ATGGCCAAAAACATCCTCAAAACTCCATCACTTCTTCAGTACATACTTGAAACAAGTTCATATCCAAAAGAACATGAACAATTGAAGCTACTTAGAGAGACAACAATCCAGAAATACGAAAAAATGAGTATCATGAATGTGCCATTGGATGAAGCACAATTCATATCTATGCTTTTGAAAATCATGAATGCCAAGAAAACATTAGAAATTGGAGTTTTCACTGGTTATTCTCTTCTTACTACTGCTCTTGCTCTTCCTCCTAATGGCAAGATAATAGCAATTGATATGAATAAAGAAGCCTATGAGACAGGATTGCCTTTCATTCAGAAGGCTGAAGTTGACCACAAAATTGACTTTATCCAAAGTGATGCATTATCAGCTATCAATAGTCTTATTGATGGAAAACATGAAGAATCATTTGATTATGCATTTGTTGATGCTGACAAAGAAAACTTCATAAAGTATCATGAGCTGTTATTGAAATTGGTGAAGAAGGGTGGAATAATTGCTTATGACAATACATTGTGGTCTGGTTCTGTGGCCATGTCTGAGGATGATGAAATGGAAGATATGATAAGAAGAAAAAGAAATATTGCAATTGAATTCAACAACTATATTGCAAATGATACTCGCATTGAATCGACAATCCTTTCTATTGGGGACGGTGTAACTCTCTGTCGACTTCTCTAA 690 0.3478 MAKNILKTPSLLQYILETSSYPKEHEQLKLLRETTIQKYEKMSIMNVPLDEAQFISMLLKIMNAKKTLEIGVFTGYSLLTTALALPPNGKIIAIDMNKEAYETGLPFIQKAEVDHKIDFIQSDALSAINSLIDGKHEESFDYAFVDADKENFIKYHELLLKLVKKGGIIAYDNTLWSGSVAMSEDDEMEDMIRRKRNIAIEFNNYIANDTRIESTILSIGDGVTLCRLL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04055 229 PANTHER O-METHYLTRANSFERASE-RELATED 3 227 - -
Trre8g04055 229 Gene3D Vaccinia Virus protein VP39 1 228 IPR029063 -
Trre8g04055 229 CDD AdoMet_MTases 68 171 - -
Trre8g04055 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 227 IPR029063 -
Trre8g04055 229 Pfam O-methyltransferase 17 227 IPR002935 GO:0008171
Trre8g04055 229 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 4 229 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04055 Trre-Chr8 45349050 45351393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04055 3 229 Monolignol Biosynthesis Gene Families AT1G67990 56.388 3.26e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04055 K00588 K13272 gmx:100813350 344.354