Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04054 ATGGTAACAAATGATGGATCAAGCTTAAGTGTTCTTATTGCTTACCGATTTGTCTTTTCTACTGCCTTCACTGTACCACTTGCTCTCTTCTTTGAAAGGAGAAGTGTGCAAAACCTGACAGGAAAGGTGCTATTCCAAGCTTTTCTTTGTGGTTTATTTGGGGGATCCTTACAACAGAACCTCTATGTTAAATCTTTGGCCCTGGTATCAGCAACATATACTATAACCATGTTAAACCTCATCCCTGCCATTACCTACATCATGGCTGTTTCTCTTAGAATGGAGAAGCCAAATCTTGGAACACCAGCTGGGAAAGCCAAGTTGATAGGAACTTTAAGTGGAATTGGTGGTGCCATGATCCTCACTTTATACAAAGGCAAAAGATTATTTAACTTTTCAATGCACATTGACTTATTGCAACAATATGTGACATCAACACCACATAAGCCCCCTGCTGGTTCTCATGTTTGGGGTATCATGCTAGCTTTGGGCACTTCTCTTAGTTTCTCATTATGGTATATAACCCAGTCAAAGATGGCTGCAAATTTTCCGTGGCACTATTCAACGGCAGCTTTAACCTCTTTAATGGGTGCAATACAATCCTTTGTATTCGCTGTTTGTACGGAGAGGGATCGGAGAGAATGGAAGATCGATTGGAATTTGAGACTTTTAACGGCAGCTTCTGGGGGTATATTGGCCTCCGGGGTGTGCTTTGTCCTATTAGCTTGGTGTGTCCGCATGAAAGGACCCTTATATGTGTCTGCTTTTAATCCTCTATTGCTTGTGCTTGTTGCCTTCATTGCATCATTGGTACTAGATGAGTACATTACAGTTGGAAGTCTAACAGGAGCCACATTGATTGTGTGTGGATTGTACATGTTATTATGGGGTAAAAGCAAAGAAGCAAGACAAGTGAATAATAATATGAATGAAATAGTGTATGTAAAACACCCTGATAAATGTGATTCAATTCACATTCCCAACTCATCTTTAACTTGCATCCAAAAGGATCATGACAAGGATACTTTAGGCTAA 1035 0.4019 MVTNDGSSLSVLIAYRFVFSTAFTVPLALFFERRSVQNLTGKVLFQAFLCGLFGGSLQQNLYVKSLALVSATYTITMLNLIPAITYIMAVSLRMEKPNLGTPAGKAKLIGTLSGIGGAMILTLYKGKRLFNFSMHIDLLQQYVTSTPHKPPAGSHVWGIMLALGTSLSFSLWYITQSKMAANFPWHYSTAALTSLMGAIQSFVFAVCTERDRREWKIDWNLRLLTAASGGILASGVCFVLLAWCVRMKGPLYVSAFNPLLLVLVAFIASLVLDEYITVGSLTGATLIVCGLYMLLWGKSKEARQVNNNMNEIVYVKHPDKCDSIHIPNSSLTCIQKDHDKDTLG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04054 344 Pfam EamA-like transporter family 12 104 IPR000620 GO:0016020
Trre8g04054 344 Pfam EamA-like transporter family 157 295 IPR000620 GO:0016020
Trre8g04054 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 300 - -
Trre8g04054 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 15 126 - -
Trre8g04054 344 PANTHER WAT1-RELATED PROTEIN 2 306 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04054 Trre-Chr8 45344533 45348690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04054 1 322 Nodulin-like Gene Family AT1G25270 35.494 2.42e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04054 - - psat:127105848 568.155