Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04053 ATGGTTAAATTATTCAGTGTTGAAACCATAGAGAATGCAAAGCCTATTTTATTGATGATAGTGGTCCAATCTATATATGCAGTGGTGAATATCATGTTAAAGATGGTAACAAATGATGGATCAAGCTTAAGTGTTCTTATTGCTTACCGATTTGTCTTTTCTACTGCCTTCACTGTACCACTTGCTCTCTTCTTTGAAAGGAGAAGTGTGCAAAACCTGACAGGAAAGGTGCTATTCCAAGCTTTTCTTTGTGGTTTATTTGGGGGATCCTTACAACAGAACCTCTATGTTAAATCTTTGGCCCTGGTATCAGCAACATATACTATAACCATGTTAAACCTCATCCCTGCCATTACCTACATCATGGCTGTTTCTCTTAGAATGGAGAAGCCAAATCTTGGAACACCAGCTGGGAAAGCCAAGTTGATAGGAACTTTAAGTGGAATTGGTGGTGCCATGATCCTCACTTTATACAAAGGCAAAAGATTATTTAACTTTTCAATGCACATTGACTTATTGCAACAATATGTGACATCAACACCACATAAGCCCCCTGCTGGTTCTCATGTTTGGGGTATCATGCTAGCTTTGGGCACTTCTCTTAGTTTCTCATTATGGTATATAACCCAGTCAAAGATGGCTGCAAATTTTCCGTGGCACTATTCAACGGCAGCTTTAACCTCTTTAATGGGTGCAATACAATCCTTTGTATTCGCTGTTTGTACGGAGAGGGATCGGAGAGAATGGAAGATCGATTGGAATTTGAGACTTTTAACGGCAGCTTCTGGGGGTATATTGGCCTCCGGGGTGTGCTTTGTCCTATTAGCTTGGTGTGTCCGCATGAAAGGACCCTTATATGTGTCTGCTTTTAATCCTCTATTGCTTGTGCTTGTTGCCTTCATTGCATCATTGGTACTAGATGAGTACATTACAGTTGGAAGTCTAACAGGAGCCACATTGATTGTGTGTGGATTGTACATGTTATTATGGGGTAAAAGCAAAGAAGCAAGACAAGTGAATAATAATATGAATGAAATAGTGTATGTAAAACACCCTGATAAATGTGATTCAATTCACATTCCCAACTCATCTTTAACTTGCATCCAAAAGGATCATGACAAGGATACTTTAGGCTAA 1137 0.394 MVKLFSVETIENAKPILLMIVVQSIYAVVNIMLKMVTNDGSSLSVLIAYRFVFSTAFTVPLALFFERRSVQNLTGKVLFQAFLCGLFGGSLQQNLYVKSLALVSATYTITMLNLIPAITYIMAVSLRMEKPNLGTPAGKAKLIGTLSGIGGAMILTLYKGKRLFNFSMHIDLLQQYVTSTPHKPPAGSHVWGIMLALGTSLSFSLWYITQSKMAANFPWHYSTAALTSLMGAIQSFVFAVCTERDRREWKIDWNLRLLTAASGGILASGVCFVLLAWCVRMKGPLYVSAFNPLLLVLVAFIASLVLDEYITVGSLTGATLIVCGLYMLLWGKSKEARQVNNNMNEIVYVKHPDKCDSIHIPNSSLTCIQKDHDKDTLG 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04053 378 PANTHER WAT1-RELATED PROTEIN 14 340 IPR030184 GO:0016020|GO:0022857
Trre8g04053 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Trre8g04053 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 160 - -
Trre8g04053 378 Pfam EamA-like transporter family 14 138 IPR000620 GO:0016020
Trre8g04053 378 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04053 Trre-Chr8 45344431 45348690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04053 14 356 Nodulin-like Gene Family AT1G25270 35.652 2.17e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04053 - - psat:127105848 620.928