Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04050 ATGACGGAGGTAATTTATAATTCATTAAAAGGAGCAATACCAGTGGTGCTAATGGTGTTGTCTCAGGTTGGATATGCTGCTGTGAATATAATATACAAGCTGGCCATAAATGACGGAATGAGTATGAGGGTAGCTGCCGCTTACCGCCTCTCTTTTGCAGCGGCTTTCACTATTCCCCTTGCTCTTATCTTTGATAGGAAGAAGAGACCAAAGCTTACATGGAAGGTTCTCTATATGACATTTCTTTGTGGATTATTTGGGGGAAGTTTGCTTCTAAACCTTTATGGCGTGGGACTGACTTTAACTTCAGCAACATTTATGTTGTCGATGCTCAACCTTGTTCCAGGAGTTACCTTCATCATGGCCATATCCTTCGGATTGGAAAAGCTAAATTGGGGATTAACAGAGGGAAAGGCCAAGATAATAGGAACATTAATTAGCATTAGTGGGGCAATGCTGATGATATTTTACAAAGGAGTAGAAATTGATATTTGGAAATCCAATATAAACCTTATGCATCAACGTCATAGTCAAAATGGGCTTATGGAACCACTACATGCTGATTTTAGTAATAAACTATTGGGAATTCCATGTGCTATAGGAAGTTGTTGCTCTTTTTCTCTGTGGTTAATTATCCAGACTAAGTTGAATGAAGAGTATCCATGCCATCATTCAAGCTCAGCTTTGATGTCCACCATGGGAGCAATTCAAGCCATTGTTTTGGCTCTTTGTGTTGATAGAGAATGGGCGCAATGGAAGCTCGGTTATGATATCAGACTTCTCACTATTGTTTATTCGGGAATTGTAGGTTCTGGAATAGTGATTGTTGCCATTGCTTGGTGCATAAAAATGAGAGGTCCTATATTTGCATCTATTTTCAATCCTCTTCAGCTTTTACTTGTAGCTATCTCTGCCTATTTGTTATTGAATGAGAAGTTATATTTAGGAAGTGTCTTTGGAGCAGTGTTAATTGTATCCGGCATATATGCAGTGCTTTGGAGCAAGAGCAAAGAAATGAAAAAGAAGACTAAGTTATTATCAGTAGAGATTGACATTAAGTCTGAAACAGTGGTAGAGATCATTATGTCGAAACCTCACAAGTGA 1104 0.3859 MTEVIYNSLKGAIPVVLMVLSQVGYAAVNIIYKLAINDGMSMRVAAAYRLSFAAAFTIPLALIFDRKKRPKLTWKVLYMTFLCGLFGGSLLLNLYGVGLTLTSATFMLSMLNLVPGVTFIMAISFGLEKLNWGLTEGKAKIIGTLISISGAMLMIFYKGVEIDIWKSNINLMHQRHSQNGLMEPLHADFSNKLLGIPCAIGSCCSFSLWLIIQTKLNEEYPCHHSSSALMSTMGAIQAIVLALCVDREWAQWKLGYDIRLLTIVYSGIVGSGIVIVAIAWCIKMRGPIFASIFNPLQLLLVAISAYLLLNEKLYLGSVFGAVLIVSGIYAVLWSKSKEMKKKTKLLSVEIDIKSETVVEIIMSKPHK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04050 367 Pfam EamA-like transporter family 14 155 IPR000620 GO:0016020
Trre8g04050 367 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
Trre8g04050 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 337 - -
Trre8g04050 367 PANTHER WAT1-RELATED PROTEIN 14 342 IPR030184 GO:0016020|GO:0022857
Trre8g04050 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04050 Trre-Chr8 45327952 45333917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04050 15 343 Nodulin-like Gene Family AT1G25270 41.033 1.42e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04050 - - mtr:25493310 528.865