Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04048 ATGGGAAGCTTGTGGGATGATAGGTTGAAGCCAGCCTTGCTAATGATTGGGGTGCAAATAGTATTTTCTGCTTGCAATATTCTTTACAAGTTTGCCATATTTGATGGAATGAGTACTATTGTCATTGCAGCTTATCGCTTAGCCTTTGCAACGGTTACCACTATTCCTCTTGCTCTTATTTTTGAAAGGAAGAGGCCGAAGATGACTTGGAGGGTGTTTAACCTTTCACTTCTAAGTGGATTATTTTCTGGACTTTTATTTCAAAACCTATTCTATGGAGCTTTGGTTTTGGCACCAGCAACTCTTGTATCAGCTATCTACAACCTTGTTCCCTCCATCACCTTTCTCTTGGCTGTATCCTTCGGTTTAGAGAAGTTAAATTGGGGAGCAGCAACAGGAAAGACAAAGGTTGCAGGAACTATACTTGGACTTGCTGGTGCATTGTTGTTGATATTATACAAAGGAGTAGAATTTGATATTTGGCCTTTTGCAATCAATCTTTTGGATCCAAACAAAAGCCAAACAGGACATGTCACTGATACTACTTCTGAATTGTTAGGTGTTATATGTGTTATACTTAGTTGCTTATGTTTCTCAATTTGGCTCATCATTCAGGCTAAGATTAGTGAAGTATATCCATGTCCTCAATCAAGCATAGCTTTGATGTCTGTAATAGCAACTATACAATGTTTTATTTTTGGTTTCATTGTTGAGAGGGATTTGAATGAATGGAAGCTTGGTTGGGATGTTAGGCTCTTCACTGTCGCTTTTTCGGGTATTATGGCGTCCGGACTAATGGTTCTTGTCTTGGCATGGGTCGTACAGATGAAAGGGCCTTTATATGCGTCCGCTTTCAACCCTCTAATGCTTTTGTTTGTAGCTTTTGTCGCATCTATGCTTCTGGATGAGAAATTAAACTTAGGAAGGTAA 930 0.3925 MGSLWDDRLKPALLMIGVQIVFSACNILYKFAIFDGMSTIVIAAYRLAFATVTTIPLALIFERKRPKMTWRVFNLSLLSGLFSGLLFQNLFYGALVLAPATLVSAIYNLVPSITFLLAVSFGLEKLNWGAATGKTKVAGTILGLAGALLLILYKGVEFDIWPFAINLLDPNKSQTGHVTDTTSELLGVICVILSCLCFSIWLIIQAKISEVYPCPQSSIALMSVIATIQCFIFGFIVERDLNEWKLGWDVRLFTVAFSGIMASGLMVLVLAWVVQMKGPLYASAFNPLMLLFVAFVASMLLDEKLNLGR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04048 309 Pfam EamA-like transporter family 186 307 IPR000620 GO:0016020
Trre8g04048 309 Pfam EamA-like transporter family 10 151 IPR000620 GO:0016020
Trre8g04048 309 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 154 - -
Trre8g04048 309 PANTHER WAT1-RELATED PROTEIN 11 307 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04048 Trre-Chr8 45294143 45299210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04048 9 308 Nodulin-like Gene Family AT1G25270 37.748 1.69e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04048 - - mtr:25493309 497.278