Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04046 ATGGTTGTTGGTGCAATTTGTGATTCTGAGTCACTTAACCATGCAGTCACAATTCCAAATCCTACAAAGGAAATGGAAGAAAAACAAATTCAAATCACAAAAGAAAATAATAACAATACCAATATTGATTATTGGCAAAGAGCTCAATGGCTTCGTGCGGCCGTATTAGGAGCAAATGATGGATTAGTTTCTGTTGCTTCACTAATGATGGGAGTAGGAGCTGTTAAAACCGATAGCACGGCAATGTTAGTCGCGGGTTTTGCAGGATTAGTCGCGGGAGCATGTGGTATGGCAATAGGAGAATTTGTTTCTGTTTTCACTCAATATGAAGTTGAAGTTGGTCAAATGATGAGAGATTTAGGAACAAGTGATAGAAAAGAAAAGGAATTGGAAATTGAGTTGGAGAAAAGGAAATCATTGCCTAATCCATTACAAGCTGCTTTAGCTTCTGCATTCTCATTTTCTATAGGTGGTTTGGTTCCTTTACTTAGTGGTTCATTTATAAGTGATTATAAGATAAGGCTTATTGTGATTGTTTCAATAGCTAGTTTGGCTTTGGTTGTTTTTGGAAGAATTGGTGCTATGCTTGGTAAGACACCAAAATTGAAATCTTCTATTAGGTTTCTTTTTGGTGGATGGATGGCTATGGCAATCACTTTTGGGTTAACTAAATTACTTGCACATTCTAGTGGTTTGGATCTTTGA 705 0.3674 MVVGAICDSESLNHAVTIPNPTKEMEEKQIQITKENNNNTNIDYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVKTDSTAMLVAGFAGLVAGACGMAIGEFVSVFTQYEVEVGQMMRDLGTSDRKEKELEIELEKRKSLPNPLQAALASAFSFSIGGLVPLLSGSFISDYKIRLIVIVSIASLALVVFGRIGAMLGKTPKLKSSIRFLFGGWMAMAITFGLTKLLAHSSGLDL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04046 234 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 25 227 IPR008217 GO:0005384|GO:0030026
Trre8g04046 234 CDD Nodulin-21 49 201 - -
Trre8g04046 234 Pfam VIT family 126 223 IPR008217 GO:0005384|GO:0030026
Trre8g04046 234 Pfam VIT family 51 119 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04046 Trre-Chr8 45264523 45265227 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04046 24 232 Nodulin-like Gene Family AT3G43660 56.938 2.23e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04046 K22736 - gmx:100810586 273.478