Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04044 ATGGCTTCCCAACTTGGAGCAAGAACCAATGGAATTTCACCAAATAATTTTCAAATTGAGATTCCTATCCATACCAATAATACTACTACTATAGTAGATAAAAAACAGAACCAAAGTATTGATGAAAATGAGAGTAATAACATTGATTACTCTCAAAGAGCACAATGGCTTAGAGCAGCCATGTTAGGAGCCAATGATGGATTAATCACTGTTGCATCATTGATGATTGGTATTGGAGCTATAAAAGAAGATATCAGTGTAATGTTCCTTGCTGGTTTCGCCGGTTTAGTAGCCGGTGCTTGTAGCATGGCAATTGGTGAGTTTGTTTCTGTATATACTCAATATGACATTGAGATAGCTCAAATGAAAAGAGAAAGAGAATTAGGAAATAATGCTAATAATGATGAAGAGAGTAATGAAAAGGAGAAATTGCCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCTCTAATGCCATTATTAGCAGCTGCATTTATAAAGAATCATAAGGTTAGAATGGGTGTTGTTGCTGCTGTGGTGAGTTTTGCATTGTTGGTGTTTGGATCAGTGGGAGCATTGATTGGAAAAACTCCAATTATGAGGTCTTGTGTTAGAGTTCTTATTGGTGGTTGGATGGCTATGGCTATTACTTTTGGTGTCACCAAATTGATTGGTACTACTGGACTTTGA 708 0.3686 MASQLGARTNGISPNNFQIEIPIHTNNTTTIVDKKQNQSIDENESNNIDYSQRAQWLRAAMLGANDGLITVASLMIGIGAIKEDISVMFLAGFAGLVAGACSMAIGEFVSVYTQYDIEIAQMKRERELGNNANNDEESNEKEKLPNPFQAALASALAFSVGALMPLLAAAFIKNHKVRMGVVAAVVSFALLVFGSVGALIGKTPIMRSCVRVLIGGWMAMAITFGVTKLIGTTGL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04044 235 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 34 230 IPR008217 GO:0005384|GO:0030026
Trre8g04044 235 Pfam VIT family 139 227 IPR008217 GO:0005384|GO:0030026
Trre8g04044 235 Pfam VIT family 57 139 IPR008217 GO:0005384|GO:0030026
Trre8g04044 235 CDD Nodulin-21 55 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04044 Trre-Chr8 45261536 45262243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04044 37 235 Nodulin-like Gene Family AT3G43660 62.814 5.62e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04044 K22736 - gmx:100809524 307.375