Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04041 ATGGCCTCCCAAATTGGAGCAAAAACTAATGGAATTCCATCAAATAGTTTTCAAATAGAGATTCCTATCCATACCAAAAGTGTTGAAAAAGAGAGCAACATTGACTACTTTCAAAGGGCACAGTGGCTTAGAGCAGCCATGTTAGGAGCCAATGATGGATTAATCACTGTTGCTTCATTGATGATTGGTATTGGAGCAATAAAAGAAGATATCAGTGTAATGCTCCTTGCTGGTTTTGCCGGTTTAATAGCCGGTGCTTGTAGCATGGCAATTGGTGAGTTTGTTTCTGTTTATACTCAATATGACATTGAGATAGCTCAAATTAAAAGAGAAAGAGAAATAGAAATAGCAAATAATAATAATGATGAAGAGAGTAATGAAAAGGAGAAATTGCCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTATTGGTGCTCTAATGCCATTGTTAGCAGCTGCATTTATAAAGAATCATAATATTAGAATGGGTGTTGTTGCTGCTGTGGTTAGTTTTGCATTGTTGGTGTTTGGATCAGTGGGAGCATTGATTGGTAAAACTCCAGTTATGAGGTCTTGTGTTAGAGTTCTTATTGGTGGTTGGATGGCTATGGCTATTACTTTTGGTTTCACCAAATTGATTGGCACCACTGGACTTTGA 669 0.3737 MASQIGAKTNGIPSNSFQIEIPIHTKSVEKESNIDYFQRAQWLRAAMLGANDGLITVASLMIGIGAIKEDISVMLLAGFAGLIAGACSMAIGEFVSVYTQYDIEIAQIKREREIEIANNNNDEESNEKEKLPNPFQAALASALAFSIGALMPLLAAAFIKNHNIRMGVVAAVVSFALLVFGSVGALIGKTPVMRSCVRVLIGGWMAMAITFGFTKLIGTTGL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04041 222 Pfam VIT family 43 125 IPR008217 GO:0005384|GO:0030026
Trre8g04041 222 Pfam VIT family 126 214 IPR008217 GO:0005384|GO:0030026
Trre8g04041 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 217 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04041 Trre-Chr8 45243159 45243827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04041 29 222 Nodulin-like Gene Family AT3G43660 63.918 7.93e-92 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04041 K22736 - gmx:100802489 290.041