Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04032 ATGGCCTCCCAAATTGGAGCAAAAACTAATGGAATTCCATCAAATAGTTTTCAAATAGAGATTCCTATCCATACCAAAAGTGTTGAAAAAGAGAGCAACATTGACTACTTTCAAAGGGCACAGTGGCTTAGAGCAGCCATGTTAGGAGCCAATGGTGGATTAATCATTGTTGCCTCATTGATGATTGGTATTGGAGCAATAAAAGAAGATATAAGTGTAATGCTCCTTGCTGGTTTCGTCGGTTTAGTAGCCGGTGCTTGTAGCATGGCGATTGGTGAGTTTGTTTCTGTTTATACTCAATATGACATTGAGATAGCTCAAATTAAAAGAGAAAGAGAAATAGCAAATAATAATAATGATGAAGAGAGAAATGAAAAGGAGAAATTGCCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCTCTAATGCCATTGTTAGCAGCTGCATTTATAAAGAATCATAATATTAGAATGGGTGTTGTTGCTGCTGTGGTTAGTTTTGCATTGTTGGTGTTTGGATCAGTGGGAGCAGTCATTGGTAAAACTCCAGTTATGAGGTCTTGTGTTAGAGTTCTTATTGGTGGTTGGATGGCTATGGCTATTACTTTTGGTTTCACCAAATTGATTGGCACCACTGGACTTTGA 663 0.3816 MASQIGAKTNGIPSNSFQIEIPIHTKSVEKESNIDYFQRAQWLRAAMLGANGGLIIVASLMIGIGAIKEDISVMLLAGFVGLVAGACSMAIGEFVSVYTQYDIEIAQIKREREIANNNNDEERNEKEKLPNPFQAALASALAFSVGALMPLLAAAFIKNHNIRMGVVAAVVSFALLVFGSVGAVIGKTPVMRSCVRVLIGGWMAMAITFGFTKLIGTTGL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04032 220 Coils Coil 98 125 - -
Trre8g04032 220 Pfam VIT family 43 125 IPR008217 GO:0005384|GO:0030026
Trre8g04032 220 Pfam VIT family 125 212 IPR008217 GO:0005384|GO:0030026
Trre8g04032 220 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 215 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04032 Trre-Chr8 45109920 45110582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04032 29 220 Nodulin-like Gene Family AT3G43660 64.062 1.58e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04032 K22736 - gmx:100802489 299.671