Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre8g03971 | ATGTTGTTAGGGTTTCAGGATTTGGGAGTTAGGTTTATGGCATCGCATGAAATCAATCAATCTACTATTGTGGACAATGTTGTAGTTATTATTAACGCCGGTGGTTTTCAAAAACTGCAGCAGGGACATTTAAATGCTCAGCCCACTCAAGAATGTGTAACAAAGACGTTAAAAAGATTGGAAGAGAAGATGCAAGGGCGAGTACTGAAACACATGCTATATCTTATGCGCACTGGGGAAAAGGGTGTTCGAATACGTGTAGTTCTTGCTCTTGCACATTTATGTTCCCCTGATGATCGTAAAACTATTTTCATTGACAATAATGGATTAGAATTGCTGTTGGAGCTTCTTCAATCCACAAACCAAAAGCAGAAAGGTGAAGCTTCAGCAGCGCTTCACGCAATGGCTGCCAAAGGAATGCGTGCCTCTATTCGTAATCCTGCTCCTACATCACCAACTCCCCATGTTTACTTGGGTGAGGAATATGTAAACAATCCTAAACTTTCTGATGTCACATTCATAGTTGAAGGAAAAAGATTTCATGCTCATAGGTCTTGTTTACTTTCTTCTGATATATTTCGTGCAATGTTTGATGGAGGTTTTTGGGAAAAGGAAGCCAAAAATATAGAGATTCCAAATAACTCTCCAGAGTCTTTCTACAATGAGTGA | 669 | 0.3946 | MLLGFQDLGVRFMASHEINQSTIVDNVVVIINAGGFQKLQQGHLNAQPTQECVTKTLKRLEEKMQGRVLKHMLYLMRTGEKGVRIRVVLALAHLCSPDDRKTIFIDNNGLELLLELLQSTNQKQKGEASAALHAMAAKGMRASIRNPAPTSPTPHVYLGEEYVNNPKLSDVTFIVEGKRFHAHRSCLLSSDIFRAMFDGGFWEKEAKNIEIPNNSPESFYNE | 222 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre8g03971 | 222 | Pfam | BTB/POZ domain | 161 | 220 | IPR000210 | GO:0005515 | |
Trre8g03971 | 222 | Gene3D | - | 12 | 158 | IPR011989 | - | |
Trre8g03971 | 222 | Gene3D | Potassium Channel Kv1.1; Chain A | 159 | 221 | IPR011333 | - | |
Trre8g03971 | 222 | SUPERFAMILY | ARM repeat | 25 | 139 | IPR016024 | - | |
Trre8g03971 | 222 | SUPERFAMILY | POZ domain | 160 | 220 | IPR011333 | - | |
Trre8g03971 | 222 | PANTHER | ARM REPEAT PROTEIN INTERACTING WITH ABF2 | 25 | 217 | IPR044282 | - | |
Trre8g03971 | 222 | ProSiteProfiles | BTB domain profile. | 169 | 222 | IPR000210 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre8g03971 | Trre-Chr8 | 44611784 | 44614492 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Trre8g03971 | BTB | 6.2e-10 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre8g03971 | - | - | aew:130750903 | 251.906 |