LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre8g03936	ATGGCTAGTGCTACTGAAATGGACGATAAGATTAGTTTCTGGACCTTGTGCCCTTACTGTTACATTTATTATGAGTATCCGAAGAAGTATGAAGAGTGTACCCTGCAATGTCAGAATTGTCAGAGGGGGTTTCATGCGGTGGTGATACGTTCGCCACCATTGAACGAGATAGATTCTTCGCTTTGCACTTGGGGATTTTTTCCGTTAGGGTTTTCTGGTGATTCCAAAGATGTGAATGGTGCTTCTTCTAATTGGAACCCTATTGCACCTTTATTTCCCTCTTCCATGAATGGATCTTCCAATAGAACAGATTCTGGTAATGCTGGTGAAAAAGAAGTTGTGGAGAGACCTGGGGGGAGTGCTACTGGTCCTGCAGCTGGGAATGAGAATGAAAAGAATGTTGGAGCTGTTGATGTTGCTGGTGTGAAGGGATCTTCCAATATAACAGATTCTGGTAATGCTGGTGAAAAGGAAGTTGTGGAGAGACCTGGGGGGAGTGCTACTTGTGCTGCGGCTAGGGATGGGAATGAAAAGAATGTTGGAGTCGTTGATGCTGCTGGTGTGAAGGCATATACTAGTAAGAAAGTTGTACAAAGTAGTTCCATGAGGAGGGGTGTTGGAAATTTGGATTTGAATGTGGAGTTCAGTAATGATGTGGAGGACTCTTCCTGTGTAGTGCGTGCTTGTGAAGAGGATGCAACTAGCGATGCTGAGGATGATATTGAGTGGAATGATTTTTTGAAGGGTCTTGATCATATGATCCACACCTTACCCTTTCTCAATGTGGAGGAAGATGATAAGGTTAAGGGTCATTAG	816	0.4387	MASATEMDDKISFWTLCPYCYIYYEYPKKYEECTLQCQNCQRGFHAVVIRSPPLNEIDSSLCTWGFFPLGFSGDSKDVNGASSNWNPIAPLFPSSMNGSSNRTDSGNAGEKEVVERPGGSATGPAAGNENEKNVGAVDVAGVKGSSNITDSGNAGEKEVVERPGGSATCAAARDGNEKNVGVVDAAGVKAYTSKKVVQSSSMRRGVGNLDLNVEFSNDVEDSSCVVRACEEDATSDAEDDIEWNDFLKGLDHMIHTLPFLNVEEDDKVKGH	271

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre8g03936	271	MobiDBLite	consensus disorder prediction	145	172	-	-
	Trre8g03936	271	PANTHER	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN	10	143	-	-
	Trre8g03936	271	MobiDBLite	consensus disorder prediction	92	131	-	-
	Trre8g03936	271	MobiDBLite	consensus disorder prediction	92	107	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre8g03936	Trre-Chr8	44312727	44313542	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre8g03936	12	270	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT5G64360	32.872	3.42e-37	135

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre8g03936	-		-	cam:101509006	252.677