Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03916 ATGTTCATCATTTCTGGAGTTGCCACTGATAACAGAGTGATCGATGAATTGGCTGGACTTGCAGTTGGATCTACAGTTATGTTAAATGTATTGTTTGTTGGGCGAATCACAGGAGCATCAATGAATCCAGCAAAAAGCTTAGGACCAGCTATTGTGCACCAAGAATTTAAAGGAATATGGATATATTTAGTGTCACCTATTCTAGGAGCTTTGGCTGGTACATGGGCATATACTTTCATCAGATACACAAACGAGCCAGTACGGGAAATCACCAAGAGGGCTTCATTCCTCAAAAGTTCTGGAACCAAATGA 312 0.4071 MFIISGVATDNRVIDELAGLAVGSTVMLNVLFVGRITGASMNPAKSLGPAIVHQEFKGIWIYLVSPILGALAGTWAYTFIRYTNEPVREITKRASFLKSSGTK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03916 103 Gene3D Glycerol uptake facilitator protein. 1 93 IPR023271 -
Trre8g03916 103 Pfam Major intrinsic protein 3 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre8g03916 103 SUPERFAMILY Aquaporin-like 2 92 IPR023271 -
Trre8g03916 103 PANTHER AQUAPORIN NIP2-1 1 97 IPR034294 -
Trre8g03916 103 PRINTS Major intrinsic protein family signature 23 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre8g03916 103 PRINTS Major intrinsic protein family signature 60 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03916 Trre-Chr8 44230827 44231978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03916 1 103 Major Intrinsic Protein MIP AT5G37820 60.194 1.03e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03916 K09874 - gmx:100812577 171.785