Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03885 ATGACTTCCTCTCTACTTCACTTTCTCCTCTACTCACTGATTCTTCAATCCACCAATGTTGTAGCTCAAACCAAAAGTACCGTATCCATTGGCGATTCTTATACTGCACAAACCAGCTCCTCTCCATGGTTGCCTGCACTTAAAGATACTACTGATCTATTTTTGCTTTCCATTTGGTATGCTAAAATTTCTGACAAAACTGTTGTGTGGTATGCTAATAGAGACAATCCTGCACCAAAAGGGTCAAAAGTGAAGCTCCATGCAAATGATGGGTTAGTGCTAACTTATCCAAACGGTTACGGGTTATGGAATACTACTGAGGTAATCAGTGATGGAGTTTTTCGCGGTGTGTTGAATGACACTGGCAACTTTGTACTTGAGAATGCAAATTCCAAAAGTGTTTGGGAGACTTTCAAGTTTCCTAGAGACACCTTGTTGCCTTCTCAGGTTGTTGAAAAAGGTGGAAAACTTTCTTCAAGGCTTAAGGAGACAGATTTCAGTAAAGGAAGGTTTGAGATTCTTCTACAAGGTAATGGTGATCTTATTATGCATTCTATTAATTTACCATCTGGCTATGCTAATGAAGAAGACTACTATATTAGTAATACTGTTGGATCCAATACATCAAGTGCTGGAACTCAATTGGTCTTTGACAGATCAGGAGGGTACTTGTATATCTTGGGAGAGAAGAGTGAGAAATTCAATTTGTCAGAAGTAGAGACTAAAGTCTCTACCACTGATTTTTATCTTAGAGCAACTCTTAATTTTGATGGAGTGTTCATACTTTACAAACATCCAAAGAGTTCAACTGAGAGTGAAGGTTGGACCACAGTTTGGTCTGAACCTGGTAATATTTGTAATTATATTGCTAATAAAGGTAGTGGTGTTTGTGGATACAATAGTTTCTGCACTTTAGGAGATGATAAGAGACCAAAATGTCAGTGTCCAATAGGTAGTTATTCACTGATTGATCCCGATGATCCATATGGTAGCTGCAAGACAGATTTCATACAAGGATGTGAAGAGGACAAACTAAGTAAAAACATAAATGATCTCTATGACTTTGAGACTTTGATTAACATTGATTGGCCTATGTCAGATTCTGTGCTTCAAAAGCCTTTTACTGAAGAACAATGTAAGAAATCTTGTATGGAAGATTGCTTGTGTTCTGTGGCTATTTTCAGGGAAGGTAATAGTTGTTGGAAGAAGAAGTTACCACTCTCAAATGGGAGATTTGATGTAACACTAGGTTCTAAGGCCTTCTTCAAAGTGAGAAAAGATAATACCTCCCTTGTTCCTACAATTCCAATAATTGTGAACAAGAATAATAACAGAAAAACTTTGGTTTTTGTTGGTTCTGTGCTTTTTAGTAGCTCTGCTATTCTTAATGTTGCATTTATTGTAGCAATATGTGTCTGCATCTCCTTCCTTTTTCAGTACAAGAAGAAGCTTAGAAGTGCTAGCAAAAGTGGCACTTTTGTTGAAATTGAATCCAATTTGCGTTGCTTCACATACGAAGAGCTTGAAAAAGCTACCAATGGATTTGACAAAGAGCTAGGAAGAGGAGCTTTTGGTATTGTTTATGAAGGAGTCATCAACACAGCTTCCAAAACTCGAGTGGCAGTGAAAAAGTTGAGCAGTTTTTTATTGGATCAAGGTCATAGGGAATTCAGGAATGAACTAAATTCCATTGGTCTCACTCATCACAAGAACTTGGTTCGTTTACTTGGATTTTGTGAGCGTGGAAGTGAAAGATTGCTTGTTTACGAGTACATGAGCAATGGCACTTTGGCAAATTTTCTTTTCAATGTTGTCGAGAAACATAAACCAAGTTGGAAATTAAGACTAGAAATTGCAATAGGGGTAGCTAGAGGACTTGTGTATTTACATGAAGAGTGCATCAATGGGATCATACATTGTGACATAAAGCCTCAAAACATACTCCTCGACAATTACTTCAATGCGAGAATCTCTGACTTTGGATTAGCCAAGATGTTAAACATGAATCAGAGCAAAACCAACACTGGCATAAAGGGAACAAGAGGGTATGTTGCCCTTGAATGGTTTAAAAACTTGCCTATAAACGCTAAGGTGGATGTGTATAGTTATGGAGTAGTATTACTTGAGATAATTACACTTAGAAGATGTGTTTTGGCAATGGATCAAGAAGATGAAGAGAAAGCTATATTAACTGATTATGCTTATGATTGCTACAAAGAAGGTTATGTAGATGCATTGGTTGAGGGTGATAATGAGGCATTGGAGGACAAGGAAAAGTTGGAGAAATTGGTAATGATTGCTATTTGGTGTATTCAAGAGGATCCATACCTTAGACCAACCATGAGAAATGTGTTACATATGCTTGAAGGTACCGTTGAAGTGCAGGTTCCACCATACCCCTCACCAATTAGTATTCAATATTCTCTAAATTAA 2433 0.374 MTSSLLHFLLYSLILQSTNVVAQTKSTVSIGDSYTAQTSSSPWLPALKDTTDLFLLSIWYAKISDKTVVWYANRDNPAPKGSKVKLHANDGLVLTYPNGYGLWNTTEVISDGVFRGVLNDTGNFVLENANSKSVWETFKFPRDTLLPSQVVEKGGKLSSRLKETDFSKGRFEILLQGNGDLIMHSINLPSGYANEEDYYISNTVGSNTSSAGTQLVFDRSGGYLYILGEKSEKFNLSEVETKVSTTDFYLRATLNFDGVFILYKHPKSSTESEGWTTVWSEPGNICNYIANKGSGVCGYNSFCTLGDDKRPKCQCPIGSYSLIDPDDPYGSCKTDFIQGCEEDKLSKNINDLYDFETLINIDWPMSDSVLQKPFTEEQCKKSCMEDCLCSVAIFREGNSCWKKKLPLSNGRFDVTLGSKAFFKVRKDNTSLVPTIPIIVNKNNNRKTLVFVGSVLFSSSAILNVAFIVAICVCISFLFQYKKKLRSASKSGTFVEIESNLRCFTYEELEKATNGFDKELGRGAFGIVYEGVINTASKTRVAVKKLSSFLLDQGHREFRNELNSIGLTHHKNLVRLLGFCERGSERLLVYEYMSNGTLANFLFNVVEKHKPSWKLRLEIAIGVARGLVYLHEECINGIIHCDIKPQNILLDNYFNARISDFGLAKMLNMNQSKTNTGIKGTRGYVALEWFKNLPINAKVDVYSYGVVLLEIITLRRCVLAMDQEDEEKAILTDYAYDCYKEGYVDALVEGDNEALEDKEKLEKLVMIAIWCIQEDPYLRPTMRNVLHMLEGTVEVQVPPYPSPISIQYSLN 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03885 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 49 800 - -
Trre8g03885 810 Pfam Protein kinase domain 516 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03885 810 SMART serkin_6 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03885 810 FunFam S-receptor-like serine/threonine-protein kinase 481 591 - -
Trre8g03885 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 54 184 IPR036426 -
Trre8g03885 810 ProSiteProfiles Protein kinase domain profile. 513 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03885 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Trre8g03885 810 SUPERFAMILY Protein kinase-like (PK-like) 498 803 IPR011009 -
Trre8g03885 810 ProSitePatterns Protein kinases ATP-binding region signature. 519 544 IPR017441 GO:0005524
Trre8g03885 810 Gene3D Phosphorylase Kinase; domain 1 476 591 - -
Trre8g03885 810 Gene3D - 140 275 IPR036426 -
Trre8g03885 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 796 - -
Trre8g03885 810 ProSiteProfiles Bulb-type lectin domain profile. 19 139 IPR001480 -
Trre8g03885 810 SMART blect_4 12 141 IPR001480 -
Trre8g03885 810 CDD B_lectin 51 141 IPR001480 -
Trre8g03885 810 Gene3D Transferase(Phosphotransferase) domain 1 592 796 - -
Trre8g03885 810 Pfam D-mannose binding lectin 67 150 IPR001480 -
Trre8g03885 810 Gene3D - 14 139 IPR036426 -
Trre8g03885 810 PIRSF SRK 1 810 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03885 Trre-Chr8 43900694 43903126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03885 499 800 Receptor kinase-like Gene Family AT1G60800 40.252 5.70e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre8g03885 Pkinase 9.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03885 - - gmx:100815462 1034.25