Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03871 ATGGTGTTTGCAGCACCAAAAGCAATACATGTCCAGTTCCACAATTATTTTTTGTTATCAATTTTCTTACTCTTAAATTTGATTATTCCAAATGTATCCTCAGTAACCTTCAACTTCACTAGTTTTGATCCTAATGACGAAACCATAATCTATGAAGGATCAGCAAATCCTGAATCATTAGATATCCAACTTACTATAAACTATGGAAGCATTGGTAGAGCCACGTATAACCAACCTATCCATTTGTGGAATAAAACTACAAAAAATCTCACAGATTTCACATCCCATTTCACTTTTACCATTGATTCTCATAATAGCAAACATTATGGAGATGGTATGGCATTCTTTCTTGCCCCTTATGGTTCAAAGATGCCTAATGCTACAAAAGGTCGTTCTATGGGTCTAACACTTGATGACCAAGCAATGAACTCAACTGAAACTAATCCATTTGTTGCTGTTGAGTTTGATATCTATAAGAATCCTTGGGATCCACCTCATGAACATGCCGGAATCGATATCAACTCAATGATATCTGTTGCTAATGTGACATGGTTGGCTGATATCAAAGAAGGTAAACTCAATGAGGCTTGGGTAAGTTACAATGCTAGTTCATTAAATCTAAGTGTTGTATTCACTGGTTTTGATAATGTAACCTCAACCACTGTGCATCAACATCTATCTTCCATTGTTGATCTCAGACTTTATCTACCAGAGTTTGTTACTATTGGCTTCTCAGCGGCTACAGGAAATGCAACTGCTATTCATACTCTCAATTCATGGGATTTTAGCTCAAATTTGGAAGCAGAACAAGATAACAACAAAATAAACACACAAGAACCACTTGCAAGGTCTCCATCCCTCAACACAACTTCCACTAAAACGAAAAAGTCCAAGACAGGACTAGCATTGGGACTAGGAGTTGGTGGATTTGTTTTGATCGGTGTGTTCGGTCTTATATCGGTTTGCCTGTGGAATAAGACGAAGAGAGGAAGTGAAAAGGAAGATGGTGAATTTGAACAGTACATGGGTGAGGATTTTGGAAGTGGAGGACCCAAGAAGTATACATATGCAGAATTAGCACATGCAGCTAATAATTTCAAAGATGAACATAAGCTAGGACAAGGAGGATTTGGAGGTGTTTATAGAGGTTTTCTTAAAGACATAAAATCTTATGTTGCTATCAAGAGGGTGTCAGAAGATTCTCATCAAGGGATAAAGGAGTTTGCATCAGAAGTAACAATTATTAGCAAATTAAGGCACAGAAATCTAGTGCAATTGATTGGTTGGTGTCATGACAGAAAGAAACTCTTGCTTGTATATGAGTACATGCAAAATGGTAGTTTAGACATTCATCTTTTCAAAAAACAAAGCTTTTTGAAATGGGCTGTTAGGTATACAGTTGCTAGAGGCTTAGCTTCTGCATTGTTATATTTGCATGAAGAATGGCTTTTGCAGGGACTAGGATACATGGCTCCTGAATGTGCTACCATAGGAAGGGCTAGTAAAGAAACAGATGTGTATAGTTTTGGAATTGTTGCTTTAGAGATAGCATGTGGAAGAAAACCTATCATTAAGGCTCAAGAAAATGAAATAAATATTGTGGAGTGGGTTTGGGGGCTATATGGAAGTGGGAGAATTCTTGAAGCAGTAGATCCAAGACTAGGTGAAGATTTTGAAGAGGAACAAATTAAGTGCTTAATGATTGTTGGTCTTTGGTGTACTCATCCTGATCCTAATAATAGGCCTTCAGTAAGACAAGCTACTCAAGTGCTTAATTTTGAAGCTACATTACCTAATCTTCCATCAAGTATGCCTATACCAACATATCTTGAAGGTCCTTTGAACTCATTCACTATTCCATCCACCATAAATGGTTCAGAGGAAGGTCAAAACATGAATACAGTAAGCTTGATTAGTTCAAACACAAACTCATCTGAGGTCACTACTTCTGATGATGATTCTTCTTCTGAGTCAGTTTTGTATTCTAGATAA 1992 0.371 MVFAAPKAIHVQFHNYFLLSIFLLLNLIIPNVSSVTFNFTSFDPNDETIIYEGSANPESLDIQLTINYGSIGRATYNQPIHLWNKTTKNLTDFTSHFTFTIDSHNSKHYGDGMAFFLAPYGSKMPNATKGRSMGLTLDDQAMNSTETNPFVAVEFDIYKNPWDPPHEHAGIDINSMISVANVTWLADIKEGKLNEAWVSYNASSLNLSVVFTGFDNVTSTTVHQHLSSIVDLRLYLPEFVTIGFSAATGNATAIHTLNSWDFSSNLEAEQDNNKINTQEPLARSPSLNTTSTKTKKSKTGLALGLGVGGFVLIGVFGLISVCLWNKTKRGSEKEDGEFEQYMGEDFGSGGPKKYTYAELAHAANNFKDEHKLGQGGFGGVYRGFLKDIKSYVAIKRVSEDSHQGIKEFASEVTIISKLRHRNLVQLIGWCHDRKKLLLVYEYMQNGSLDIHLFKKQSFLKWAVRYTVARGLASALLYLHEEWLLQGLGYMAPECATIGRASKETDVYSFGIVALEIACGRKPIIKAQENEINIVEWVWGLYGSGRILEAVDPRLGEDFEEEQIKCLMIVGLWCTHPDPNNRPSVRQATQVLNFEATLPNLPSSMPIPTYLEGPLNSFTIPSTINGSEEGQNMNTVSLISSNTNSSEVTTSDDDSSSESVLYSR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03871 663 PANTHER - 56 482 - -
Trre8g03871 663 Gene3D Phosphorylase Kinase; domain 1 351 442 - -
Trre8g03871 663 ProSitePatterns Legume lectins alpha-chain signature. 236 245 IPR000985 -
Trre8g03871 663 Pfam Protein tyrosine and serine/threonine kinase 488 531 IPR001245 GO:0004672|GO:0006468
Trre8g03871 663 Gene3D - 32 279 - -
Trre8g03871 663 ProSitePatterns Protein kinases ATP-binding region signature. 372 395 IPR017441 GO:0005524
Trre8g03871 663 SUPERFAMILY Protein kinase-like (PK-like) 351 608 IPR011009 -
Trre8g03871 663 FunFam L-type lectin-domain containing receptor kinase IX.1 33 275 - -
Trre8g03871 663 MobiDBLite consensus disorder prediction 274 293 - -
Trre8g03871 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 277 IPR013320 -
Trre8g03871 663 CDD lectin_legume_LecRK_Arcelin_ConA 35 266 IPR001220 GO:0030246
Trre8g03871 663 Pfam Legume lectin domain 35 275 IPR001220 GO:0030246
Trre8g03871 663 ProSiteProfiles Protein kinase domain profile. 366 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03871 663 Pfam Protein kinase domain 366 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03871 663 MobiDBLite consensus disorder prediction 640 663 - -
Trre8g03871 663 Gene3D Transferase(Phosphotransferase) domain 1 485 612 - -
Trre8g03871 663 Gene3D Transferase(Phosphotransferase) domain 1 443 484 - -
Trre8g03871 663 FunFam Lectin-domain containing receptor kinase A4.3 483 611 - -
Trre8g03871 663 FunFam L-type lectin-domain containing receptor kinase IX.1 351 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03871 Trre-Chr8 43840540 43842656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03871 27 609 Receptor kinase-like Gene Family AT5G10530 41.850 7.63e-156 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre8g03871 Lectin_legB 8.4e-68 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03871 - - cam:101491058 919.072