Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre8g03864 | ATGGTTCATATATTCGGTTATGCAAGGGAAACAATTTTGCTTTTCCTGATAGTCCCTCTTGCTCATGCTCAAACTGTGTCTTTTGATTACCCTAGGTTTAGCGGTGATCGTAAAGATCTGCCAGAGCTTGAAGGCGATGCCGTCGTTGAAGATTATGATGTTATTCGACTCACTCGGTACCCTCCTGACCCAGATAAGGCTTCTGGTGTTGGCCGAGTCAGAAGTCACAAACTTATCAAACTTTATGACAATAAAACAAATCAACTGTATGACTTCAGTACCAAGTTTTCATTTATTATATTTTCAAATCACAGTAAGCATGGAGATGGCTTGGCATTCTTCCTTGCAAGCTCAAAACTTCCAGCAACAAATTATACAGGAGGTGGAGGGGCTTTTGGTCTTATGCATGCAAAGGAAGTTACTATAAAATCTGCTGAGTACTCATTTGTGGCAGTGGAGTTTGATACTTACCACAATTATTGGGACCCAAATGTCAGCCATGTGGGAGTGAATATCAATTCTGTGGTGTCCGATAGACATATTGAATGGTACCCAGATGTTTCAAAAAGGAAAATTTATGATTGTAGCATAGAATATAGTTCCAGAAACAAAATTTTGAATGTTTCTTTCACTGGATACAGATTGAATGAAGGGCAAGAGGAGCAGAGCTTTTCACACACCATTGATCTAAGAGAGCATTTACCACATGATGTTTTTGTTGGCATTTCAGCTTCAACAGGAACTGTAGATGAGGAACATTTGTTGCAGTCGTGGTCTTTTAGTACTTGTTGTGAAGATACTCATGAGAAGAAAAGCATAACTAGATTGTTGGAAGTATTAGGAAGTGGTGTCCTAATAATATCTTTGAGTTGCATAATATTGTTATTCATTGCATTGTGGAAGAAGAATAAAGGAAAAGAAGAAGAAACCACTATGTCAGAAACCACCTCTGATCAGAATATGGATGAAGAATTCCAAATGGGTGCTGGGCCTAAGAAGATTAGTTATCAGGAATTATTGGATGCAACAAATAACTTTGAAGAGACACTGAAGCTTGGTCAAGGTGGTTTTGGTGGTGTTTATAAAGGTCATTTTAAAGACACAGACTCAGTTGCAGCTATAAAGAGGAGGATATCAACAAATGCACGGCAGGGTATAAAGCAATACTCAGCAGAAGTGAAGATCATTAGCCAATTGAGACATAGAAATTTGGTGAAACTCAATGGTTGGTGCCACAAGAAGAATGAACTTATCCTAATATACGAATACATGCCAAATGGAAGCTTAGATTTTCATCTTTTTCGCGGAGGAAGCATCTTGTCATGGCACTTGAGGTACAATATAGCTCTTGGGTTGGCCTCAGCATTGCTTTATTTGCAGGAAGAATGGGAAAAATGTGTGATTCACAGGGACATAAAATCAAGCAACATAATGTTGGACTCCAACTTCAATACTAAGCTTGGGGATTTTGGGCTAGCTAGGATGATGGATCATGAGAAAGGGTCGGAAACTACAGTTGTGGCTGGAACCAGAGGTTACCTAGCTCCTGAATACATGGACACGGGCAAGGCTAGAAAAGAATCCGACATATTCAGTTTCGGGGTTGTATTGTTGGAAATAGCCTGTGGAAAAAAGGCCATACACTACCAAGAATTGGAGGGTGAAGTATCATTAGTGGAGTGGGTTTGGGAGCTATATGGATTGAAAAATATCAATGGAGCAGCAGATCCAAAACTATACGGGCAATTTGATGTGAAGGAATTGGAATGTTTGTTAGTAGTTGGACTTTGGTGTGCTAATCCAGATAGCACATCAAGACCATCTATAAAGAAAGTGATTAAGGCGCTAAACTTTGAAACTCCATTACCAATTCTCCCACAAAATATGCCATCCCTAGCTCCTTTGACTACCACAACAACTGAGCAATTTTTGTCAGTTCCTTCTTTCTTTAGGTTTACAGGTTAG | 1965 | 0.3939 | MVHIFGYARETILLFLIVPLAHAQTVSFDYPRFSGDRKDLPELEGDAVVEDYDVIRLTRYPPDPDKASGVGRVRSHKLIKLYDNKTNQLYDFSTKFSFIIFSNHSKHGDGLAFFLASSKLPATNYTGGGGAFGLMHAKEVTIKSAEYSFVAVEFDTYHNYWDPNVSHVGVNINSVVSDRHIEWYPDVSKRKIYDCSIEYSSRNKILNVSFTGYRLNEGQEEQSFSHTIDLREHLPHDVFVGISASTGTVDEEHLLQSWSFSTCCEDTHEKKSITRLLEVLGSGVLIISLSCIILLFIALWKKNKGKEEETTMSETTSDQNMDEEFQMGAGPKKISYQELLDATNNFEETLKLGQGGFGGVYKGHFKDTDSVAAIKRRISTNARQGIKQYSAEVKIISQLRHRNLVKLNGWCHKKNELILIYEYMPNGSLDFHLFRGGSILSWHLRYNIALGLASALLYLQEEWEKCVIHRDIKSSNIMLDSNFNTKLGDFGLARMMDHEKGSETTVVAGTRGYLAPEYMDTGKARKESDIFSFGVVLLEIACGKKAIHYQELEGEVSLVEWVWELYGLKNINGAADPKLYGQFDVKELECLLVVGLWCANPDSTSRPSIKKVIKALNFETPLPILPQNMPSLAPLTTTTTEQFLSVPSFFRFTG | 654 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre8g03864 | 654 | CDD | STKc_IRAK | 352 | 617 | - | - | |
Trre8g03864 | 654 | ProSitePatterns | Legume lectins beta-chain signature. | 150 | 156 | IPR019825 | - | |
Trre8g03864 | 654 | SMART | serkin_6 | 346 | 618 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre8g03864 | 654 | FunFam | receptor-like protein kinase FERONIA | 306 | 423 | - | - | |
Trre8g03864 | 654 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 23 | 266 | IPR013320 | - | |
Trre8g03864 | 654 | Gene3D | Transferase(Phosphotransferase) domain 1 | 424 | 632 | - | - | |
Trre8g03864 | 654 | SUPERFAMILY | Protein kinase-like (PK-like) | 331 | 633 | IPR011009 | - | |
Trre8g03864 | 654 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 467 | 479 | IPR008271 | GO:0004672|GO:0006468 | |
Trre8g03864 | 654 | Gene3D | Phosphorylase Kinase; domain 1 | 331 | 423 | - | - | |
Trre8g03864 | 654 | Pfam | Legume lectin domain | 26 | 270 | IPR001220 | GO:0030246 | |
Trre8g03864 | 654 | ProSiteProfiles | Protein kinase domain profile. | 346 | 625 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre8g03864 | 654 | ProSitePatterns | Protein kinases ATP-binding region signature. | 352 | 375 | IPR017441 | GO:0005524 | |
Trre8g03864 | 654 | Gene3D | - | 23 | 267 | - | - | |
Trre8g03864 | 654 | CDD | lectin_legume_LecRK_Arcelin_ConA | 26 | 262 | IPR001220 | GO:0030246 | |
Trre8g03864 | 654 | Pfam | Protein kinase domain | 347 | 614 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre8g03864 | 654 | FunFam | Lectin-domain containing receptor kinase A4.3 | 424 | 635 | - | - | |
Trre8g03864 | 654 | PANTHER | - | 70 | 620 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre8g03864 | Trre-Chr8 | 43815343 | 43817307 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre8g03864 | 11 | 630 | Receptor kinase-like Gene Family | AT5G10530 | 44.044 | 2.43e-169 | 497 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Trre8g03864 | Pkinase | 2.5e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre8g03864 | - | - | cam:101492002 | 944.495 |