Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03864 ATGGTTCATATATTCGGTTATGCAAGGGAAACAATTTTGCTTTTCCTGATAGTCCCTCTTGCTCATGCTCAAACTGTGTCTTTTGATTACCCTAGGTTTAGCGGTGATCGTAAAGATCTGCCAGAGCTTGAAGGCGATGCCGTCGTTGAAGATTATGATGTTATTCGACTCACTCGGTACCCTCCTGACCCAGATAAGGCTTCTGGTGTTGGCCGAGTCAGAAGTCACAAACTTATCAAACTTTATGACAATAAAACAAATCAACTGTATGACTTCAGTACCAAGTTTTCATTTATTATATTTTCAAATCACAGTAAGCATGGAGATGGCTTGGCATTCTTCCTTGCAAGCTCAAAACTTCCAGCAACAAATTATACAGGAGGTGGAGGGGCTTTTGGTCTTATGCATGCAAAGGAAGTTACTATAAAATCTGCTGAGTACTCATTTGTGGCAGTGGAGTTTGATACTTACCACAATTATTGGGACCCAAATGTCAGCCATGTGGGAGTGAATATCAATTCTGTGGTGTCCGATAGACATATTGAATGGTACCCAGATGTTTCAAAAAGGAAAATTTATGATTGTAGCATAGAATATAGTTCCAGAAACAAAATTTTGAATGTTTCTTTCACTGGATACAGATTGAATGAAGGGCAAGAGGAGCAGAGCTTTTCACACACCATTGATCTAAGAGAGCATTTACCACATGATGTTTTTGTTGGCATTTCAGCTTCAACAGGAACTGTAGATGAGGAACATTTGTTGCAGTCGTGGTCTTTTAGTACTTGTTGTGAAGATACTCATGAGAAGAAAAGCATAACTAGATTGTTGGAAGTATTAGGAAGTGGTGTCCTAATAATATCTTTGAGTTGCATAATATTGTTATTCATTGCATTGTGGAAGAAGAATAAAGGAAAAGAAGAAGAAACCACTATGTCAGAAACCACCTCTGATCAGAATATGGATGAAGAATTCCAAATGGGTGCTGGGCCTAAGAAGATTAGTTATCAGGAATTATTGGATGCAACAAATAACTTTGAAGAGACACTGAAGCTTGGTCAAGGTGGTTTTGGTGGTGTTTATAAAGGTCATTTTAAAGACACAGACTCAGTTGCAGCTATAAAGAGGAGGATATCAACAAATGCACGGCAGGGTATAAAGCAATACTCAGCAGAAGTGAAGATCATTAGCCAATTGAGACATAGAAATTTGGTGAAACTCAATGGTTGGTGCCACAAGAAGAATGAACTTATCCTAATATACGAATACATGCCAAATGGAAGCTTAGATTTTCATCTTTTTCGCGGAGGAAGCATCTTGTCATGGCACTTGAGGTACAATATAGCTCTTGGGTTGGCCTCAGCATTGCTTTATTTGCAGGAAGAATGGGAAAAATGTGTGATTCACAGGGACATAAAATCAAGCAACATAATGTTGGACTCCAACTTCAATACTAAGCTTGGGGATTTTGGGCTAGCTAGGATGATGGATCATGAGAAAGGGTCGGAAACTACAGTTGTGGCTGGAACCAGAGGTTACCTAGCTCCTGAATACATGGACACGGGCAAGGCTAGAAAAGAATCCGACATATTCAGTTTCGGGGTTGTATTGTTGGAAATAGCCTGTGGAAAAAAGGCCATACACTACCAAGAATTGGAGGGTGAAGTATCATTAGTGGAGTGGGTTTGGGAGCTATATGGATTGAAAAATATCAATGGAGCAGCAGATCCAAAACTATACGGGCAATTTGATGTGAAGGAATTGGAATGTTTGTTAGTAGTTGGACTTTGGTGTGCTAATCCAGATAGCACATCAAGACCATCTATAAAGAAAGTGATTAAGGCGCTAAACTTTGAAACTCCATTACCAATTCTCCCACAAAATATGCCATCCCTAGCTCCTTTGACTACCACAACAACTGAGCAATTTTTGTCAGTTCCTTCTTTCTTTAGGTTTACAGGTTAG 1965 0.3939 MVHIFGYARETILLFLIVPLAHAQTVSFDYPRFSGDRKDLPELEGDAVVEDYDVIRLTRYPPDPDKASGVGRVRSHKLIKLYDNKTNQLYDFSTKFSFIIFSNHSKHGDGLAFFLASSKLPATNYTGGGGAFGLMHAKEVTIKSAEYSFVAVEFDTYHNYWDPNVSHVGVNINSVVSDRHIEWYPDVSKRKIYDCSIEYSSRNKILNVSFTGYRLNEGQEEQSFSHTIDLREHLPHDVFVGISASTGTVDEEHLLQSWSFSTCCEDTHEKKSITRLLEVLGSGVLIISLSCIILLFIALWKKNKGKEEETTMSETTSDQNMDEEFQMGAGPKKISYQELLDATNNFEETLKLGQGGFGGVYKGHFKDTDSVAAIKRRISTNARQGIKQYSAEVKIISQLRHRNLVKLNGWCHKKNELILIYEYMPNGSLDFHLFRGGSILSWHLRYNIALGLASALLYLQEEWEKCVIHRDIKSSNIMLDSNFNTKLGDFGLARMMDHEKGSETTVVAGTRGYLAPEYMDTGKARKESDIFSFGVVLLEIACGKKAIHYQELEGEVSLVEWVWELYGLKNINGAADPKLYGQFDVKELECLLVVGLWCANPDSTSRPSIKKVIKALNFETPLPILPQNMPSLAPLTTTTTEQFLSVPSFFRFTG 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03864 654 CDD STKc_IRAK 352 617 - -
Trre8g03864 654 ProSitePatterns Legume lectins beta-chain signature. 150 156 IPR019825 -
Trre8g03864 654 SMART serkin_6 346 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03864 654 FunFam receptor-like protein kinase FERONIA 306 423 - -
Trre8g03864 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 266 IPR013320 -
Trre8g03864 654 Gene3D Transferase(Phosphotransferase) domain 1 424 632 - -
Trre8g03864 654 SUPERFAMILY Protein kinase-like (PK-like) 331 633 IPR011009 -
Trre8g03864 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Trre8g03864 654 Gene3D Phosphorylase Kinase; domain 1 331 423 - -
Trre8g03864 654 Pfam Legume lectin domain 26 270 IPR001220 GO:0030246
Trre8g03864 654 ProSiteProfiles Protein kinase domain profile. 346 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03864 654 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Trre8g03864 654 Gene3D - 23 267 - -
Trre8g03864 654 CDD lectin_legume_LecRK_Arcelin_ConA 26 262 IPR001220 GO:0030246
Trre8g03864 654 Pfam Protein kinase domain 347 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03864 654 FunFam Lectin-domain containing receptor kinase A4.3 424 635 - -
Trre8g03864 654 PANTHER - 70 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03864 Trre-Chr8 43815343 43817307 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03864 11 630 Receptor kinase-like Gene Family AT5G10530 44.044 2.43e-169 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre8g03864 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03864 - - cam:101492002 944.495