Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03861 ATGGAATCTGTTATCGAGCGTTATAACAAGCTAACGGAGGAGCGCCATCAAGCAGTAGTGGATCCTATTTTGGATGTCAAGTTTTGGCAAAGAGAAGCAGCAAGCTTGAGGCAACAATTACAGCACTTAAATGATAGCCAAAGGCAATTGATGGGGCAAGAACTATCTAGTTTGGATTTTAATGAGCTGGGGCATCTGGAACACCAATTGGAGATGAGTTTGAAAAGCATTCGCACGAGAAAGGGTCTAGTTTATAGTGATGAGATCAATGAATTACACAAAAAGGGAAGCCTTAGTAGTAAAGAAAATGAAGAACTTCATAAGAAGATAGACCAAATTGGTGAGGAAAATGCAGAACTAGAAAAGGTTATTGGTGCAAGGCGTAGGGAATATGCAACGACCAATCCTTCATACAGTAATAGGATCAGCAATGGATACAATGAACCAATCAGTCTCCAGCTAAGGCAGCCACAACCCCAACAGTGA 486 0.4115 MESVIERYNKLTEERHQAVVDPILDVKFWQREAASLRQQLQHLNDSQRQLMGQELSSLDFNELGHLEHQLEMSLKSIRTRKGLVYSDEINELHKKGSLSSKENEELHKKIDQIGEENAELEKVIGARRREYATTNPSYSNRISNGYNEPISLQLRQPQPQQ 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03861 161 Coils Coil 103 123 - -
Trre8g03861 161 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre8g03861 161 Coils Coil 26 53 - -
Trre8g03861 161 MobiDBLite consensus disorder prediction 130 161 - -
Trre8g03861 161 MobiDBLite consensus disorder prediction 132 161 - -
Trre8g03861 161 Pfam K-box region 25 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03861 Trre-Chr8 43794490 43796837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03861 1 158 MADS-box Gene Family AT3G57230 40.994 7.10e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03861 K09264 - psat:127102740 201.445