Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03846 ATGTTGGAGTCTTTACTAACTTGTTCTCAAAGCCTCAAGGGATATGACCTGACAAAGCAAAAGAGTCCTTGTTATTCTCGTGCTGCTTCGCGAATTTGTTCGAATTCTATGTTTACTTGTTCTTCAGTTGACAAGCAAGTTCCTATTACATCACATATATGTCATAGTACAGTTTTATCAGAAAAATTCGCTAGAAGAACGTCTCTAGATGTTCCTTCGTTTTCTGGTCGGAAATTATCCTATTTCTCTAAGTATAGGTCACTACAATGGGAACGGTTGCGTACAAATGCAACATATGATGTTGCTGGTGCTGTTGAAGTTATCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCAGTTACTGTCTTTATCGTCCCCTCGTTCAAGTTAATTAAAGCCAGTCCTATACTCGGTTTCTTCTGTGCTGGGGTGGTGCTCAATCAGTTTGGTTTAATCAGGAACCTTGAAGATGTTAAAGTTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAACTTTCACTAGCACGTCTTAAAGCTCTTGCAAAATATGCCTTTGGAATGGGATTGGCTCAGGTTCTACTATCTACTTTAGCATTCACTGCTTTTGAGCTTCCACCAAATGGGGCTGTTGGAACAAAAATTTTGCAATATCTTTTCCACTCAAGGTCTGATCTGGTGAACATCAGAAGTATCGATGAAGCTGTAGTGATTGGGGCTGCTCTCTCTTTGTCGTCTTCTGCATTTGTTTTACAGCTTCTTGCAGAGAAAGGCGAGCTTCCTACAAGGCTTGGTTCAGCAACTCTTGGGATACTTCTTTTGCAGGACATAGCTGTTGTGCCTCTTTTGGTCATACTTCCAGTACTTGAGAGCCAGAATATGGCTGAGGGAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTGAAGGCATTAGGTGGATTGGGTCTGCTTTCTTTTGGAGCAAAGTTTTTTCTCAGAAGAGTTTTTGAGGTTGTAGCAGATACAAGAAGTTCAGAGGCTTTTGTCGCTCTTTGCTTGCTGACTATTGCTGGGACTTCACTAATCACACAGAAATTGGGCTTCAGTGATACGCTTGGAGCATTTTTAGCTGGGGCAATCCTAGCAGAGACAAATTTCAGGACCCAAATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTGCTCGGGTTGTTTTTTCTAACTACAGGGACTTCAATTGACATGCAGGTTCTCTTGAGAGAGTGGCCAAACGTACTTGCGCTCTTGGCGGGTTTAATTACTATCAAGACATTGATTATAACTGCGATTGGTCCTCGTGTTGGCCTTACTTTAAAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGAGAGTTTGGATTTGTAGTATTCTCTTTGGCGAATAGTCTTGGGGTGCTTCCACTTGAGCTCAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCGTTAACCCCATTTCTGAATGAAGCTGGAAGGAGGGCTGCTAGCTTTATTGAAGACAATTATGAAGCTGAGAATAAAGAGAAAGATTCTGAGATGATTAACTTTGAAGTTAATGAACCTGTCGTCGTCCTTGGATTTGGACAAATGGGGCAGGTCCTTGCCAATTTGCTGTCCAACCCAATGGCTTCTGGAGGAGATAGTGATGGAATAGGCTGGCCTTATGTGGCATTTGATATTGACCCCAGGGTTGTAAAGGCAGCTAGAAAACAAGGTTTTCCTATTCTCTATGGGGATGGATCACGTCCAGCTGTTCTACAATCTGCCGGTATCTCTTCTCCAAAAGCTATCATGATTATGCTCACTGAGAAGGCGAAGTCAATTGAAGCTGTTCAGAGGCTACGACTGGCTTTTCCTGCAGTTCCAATATACGCCAGAGCTCGAGATCTAAAACATCTTTTAGATTTGAAGAAAGCAGGTGCAACGGATGCTACTTTGGAAAAGGCTGAGACTAGCTTACAACTTGGTTCTAAGATGCTGAAAGGCCTCGGGATGATGTCCGATGATGTATCATTTTTGAGTCAGCTTGTTAGAGATTCTATGGAGCAACAAGCTGAAGAAGAAATCAGCCAACGAGAATATCGGGAATCAAATATAATGGAACCATTGCAGGTGAGAGTTTCTGACATAAGGGGGCCACGCATTCCGGTGACAACTACTACACCAAAATCTGAATTATCAGTACAGAACCAGAAAGATCAAGCTTCATTGAGCACAATTCAGAAGGAAGCAGATCCTGAAGAACAAGATTATGAGCTAAATCAAGCTGTTAAATTAGAAGGAAACGGTGCTTCATATAGCAGCAAACAAGATATCGAAGAAAGCTCAGCGGTTGGATCTCAAGATGATTTAGGAAAGTAG 2403 0.4186 MLESLLTCSQSLKGYDLTKQKSPCYSRAASRICSNSMFTCSSVDKQVPITSHICHSTVLSEKFARRTSLDVPSFSGRKLSYFSKYRSLQWERLRTNATYDVAGAVEVINDLGLDTLTFLAVTVFIVPSFKLIKASPILGFFCAGVVLNQFGLIRNLEDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVLLSTLAFTAFELPPNGAVGTKILQYLFHSRSDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRLGSATLGILLLQDIAVVPLLVILPVLESQNMAEGSIWPMLAQESLKALGGLGLLSFGAKFFLRRVFEVVADTRSSEAFVALCLLTIAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQVLLREWPNVLALLAGLITIKTLIITAIGPRVGLTLKESVRIGLLLSQGGEFGFVVFSLANSLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEDNYEAENKEKDSEMINFEVNEPVVVLGFGQMGQVLANLLSNPMASGGDSDGIGWPYVAFDIDPRVVKAARKQGFPILYGDGSRPAVLQSAGISSPKAIMIMLTEKAKSIEAVQRLRLAFPAVPIYARARDLKHLLDLKKAGATDATLEKAETSLQLGSKMLKGLGMMSDDVSFLSQLVRDSMEQQAEEEISQREYRESNIMEPLQVRVSDIRGPRIPVTTTTPKSELSVQNQKDQASLSTIQKEADPEEQDYELNQAVKLEGNGASYSSKQDIEESSAVGSQDDLGK 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03846 800 Gene3D - 533 704 - -
Trre8g03846 800 ProSiteProfiles RCK N-terminal domain profile. 535 667 IPR003148 GO:0006813
Trre8g03846 800 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 95 763 - -
Trre8g03846 800 MobiDBLite consensus disorder prediction 728 756 - -
Trre8g03846 800 MobiDBLite consensus disorder prediction 724 800 - -
Trre8g03846 800 Pfam Sodium/hydrogen exchanger family 117 502 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre8g03846 800 Pfam TrkA-N domain 536 658 IPR003148 GO:0006813
Trre8g03846 800 Gene3D - 110 509 IPR038770 -
Trre8g03846 800 MobiDBLite consensus disorder prediction 774 791 - -
Trre8g03846 800 FunFam Glutathione-regulated potassium-efflux system protein KefB 533 705 - -
Trre8g03846 800 FunFam K(+) efflux antiporter 3, chloroplastic 110 509 - -
Trre8g03846 800 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 536 674 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03846 Trre-Chr8 43669586 43678445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03846 6 790 Inorganic Solute Cotransporters AT4G04850 67.134 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03846 K03455 - gmx:100798214 1161.36