Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03810 ATGGAATTCTCTAAACAATTCAAAGATTCATTTAGGCAAGGCCTTATTGCTGGCTATTTTTTCACAGCAACTTTTGTCATTGTTTTTTATTTGTCCTATTGTCTACCCACACAAATCAAGATGAGGAAAAATAAGAACCTTAGACTTAAGAAATCAGGAGAGGTGAGCAAATTGCCTAATCAGGACTTGAAACAACAAAAGATCAAAGAGGAACAGAAACTAAAGAAATTCAGACAAAAAGAAAAAATGTTGCCTGTGGAGTTGCTAGAGAAAAGAATACAGATCAATGAAGTTGGACGATCAGCTTATAGAATAAACTTCACAAAACTTTGTCATGCAACAAATTACTTTAGTAAGGACAATGTTATTGGGGTGGGAGTGATTGGAATAATGTACAAAGCAACATTTCCCAACAATTGTTTCTTGGCAGTTAAGAAACTACATGATTCTTCTCAATTGTGTATAAAAAGGTTTGAGCTAGAAATAATGATTTTGGGACAATATAGTCACCAAAACATACTTCCCTTGATTGGATTCTGCATAGAGGAAGAAAAAAATGAAAGAATTTTGGTGTATCAATACATGTCAAATGGAACACTTTCTGATTGGTTGAATGATGATACTACAAAATTAGGATGGATAAGGGTTATTAAAATTGCACTTGGTGTAGCAAGAGGTTTATGTTGTCTCCATCATAGTTTGCATATGGTTCATCTTAGTATAAGCTTAGAATGTATCTTGTTAGGGGACAATTTCGAGCCGAAAATATCCAATTTTGGAGGGGTCATGTTTATGAATAATGATATTGATTTGAACAAAAACATAAGATTTGAAAAGAAGGATGTTTATGACTTTGGTTGCTTGCTTTTTGAGTTGATTAAGGGGAAGAAATTTGGCCAAAGACATATTTGTTTAACCAATAATAATGTTCCGTTCGCGACGTACACATATCCAAATCCTATTAACCTATTGGAGGACCATTTTGGGTTCTATGATGCAATGGATGAAACACTAAACAAGATAGAATTTGAAGATGAGGTATCTTCTCTTCTTAGAGTTGCATGTGATTGTGTTCATCCTATCCTTGATAAAAGGCCTACTAAGCTTGAGGTGTACAATAAGATGGGAAACATATGGGAAAAAGATGAGATTTTTGATGAAGATCATGACCAATCTGGCCTAATGCATTACTCTTAA 1197 0.3392 MEFSKQFKDSFRQGLIAGYFFTATFVIVFYLSYCLPTQIKMRKNKNLRLKKSGEVSKLPNQDLKQQKIKEEQKLKKFRQKEKMLPVELLEKRIQINEVGRSAYRINFTKLCHATNYFSKDNVIGVGVIGIMYKATFPNNCFLAVKKLHDSSQLCIKRFELEIMILGQYSHQNILPLIGFCIEEEKNERILVYQYMSNGTLSDWLNDDTTKLGWIRVIKIALGVARGLCCLHHSLHMVHLSISLECILLGDNFEPKISNFGGVMFMNNDIDLNKNIRFEKKDVYDFGCLLFELIKGKKFGQRHICLTNNNVPFATYTYPNPINLLEDHFGFYDAMDETLNKIEFEDEVSSLLRVACDCVHPILDKRPTKLEVYNKMGNIWEKDEIFDEDHDQSGLMHYS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03810 398 Coils Coil 60 80 - -
Trre8g03810 398 PANTHER OS01G0253100 PROTEIN 71 375 - -
Trre8g03810 398 Gene3D Transferase(Phosphotransferase) domain 1 195 395 - -
Trre8g03810 398 SUPERFAMILY Protein kinase-like (PK-like) 100 373 IPR011009 -
Trre8g03810 398 ProSiteProfiles Protein kinase domain profile. 117 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03810 398 Pfam Protein tyrosine and serine/threonine kinase 120 261 IPR001245 GO:0004672|GO:0006468
Trre8g03810 398 Gene3D Phosphorylase Kinase; domain 1 73 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03810 Trre-Chr8 43353391 43355379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03810 57 391 Receptor kinase-like Gene Family AT1G69990 28.889 1.51e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre8g03810 PK_Tyr_Ser-Thr 8.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03810 - - tpra:123911597 486.108