Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03807 ATGCTAACAGGTGAAATTCCAAAAGAATTTGCCTCGCTTAGAAGGCTTAAAAGTATTGATTTTTCTGACAATCAATTGTATGGGCAAGTGCCAATGTTCGAACACTTAGTGAAAGTTGGCTATGCTAACAATAAAAGACTTTGTGGAGGGTCTTTGAGACCTTGCTCCTCGACACATGACAAGCTAGACGATTTCCATCAATCATTCAAAGGAGGTTTTATTATTGGTTATGTTTTTTCATTCATTTTTTCTGTTATGATCACTAGTATGTTCTACTCCAAATGCGCACATTGGGTGCATCAATTGAAGAAGAGAAAAAGCATTATCATAAACAAAGCTAAAGAACTGGGCACATATATTTGCTCCATCACAAGCAGGAGAACACAGACGGTAGTTAATCACATGCACGAACTGTTAAATTCACAGATGGTACACAACGAAAGAAAAGAGATCTCTGTACTATTGGAAAGATTGATATCAACAATATGGTTAGAAGAACTGCGTGATGCAACTGACTGTTTCTCTATGGACAATGCCATCGGCGTAGGAAAGATGGGAATGATGTACCAAGCAACTCTATCTAATGGTCAGTTACTAGCTGTTAAGAGACTATTTGACTCTGAGTTGTTTAAAAGGCAGTTCCTTTTAGAAACTATGATTATCGGTAGGTACATACACAACAATATAGTTCCTCTGCTTGGGTTCTGTATTGAAGGAAAGGAAAGGCTTTTGGCTTACCCATACATGTCAAATGGAAGGCTTTCCAAATGGTTGCATCCTTTGGAAAATTCTAATACATTAAGGGTGTTAGAATATGCTTCTTGCATTACTGTAGACGAAATTGTTGAGTTTTAA 855 0.3719 MLTGEIPKEFASLRRLKSIDFSDNQLYGQVPMFEHLVKVGYANNKRLCGGSLRPCSSTHDKLDDFHQSFKGGFIIGYVFSFIFSVMITSMFYSKCAHWVHQLKKRKSIIINKAKELGTYICSITSRRTQTVVNHMHELLNSQMVHNERKEISVLLERLISTIWLEELRDATDCFSMDNAIGVGKMGMMYQATLSNGQLLAVKRLFDSELFKRQFLLETMIIGRYIHNNIVPLLGFCIEGKERLLAYPYMSNGRLSKWLHPLENSNTLRVLEYASCITVDEIVEF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03807 284 ProSiteProfiles Protein kinase domain profile. 174 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03807 284 SUPERFAMILY Protein kinase-like (PK-like) 162 265 IPR011009 -
Trre8g03807 284 Gene3D Ribonuclease Inhibitor 1 63 IPR032675 -
Trre8g03807 284 PANTHER OSJNBA0070M12.3 PROTEIN 2 265 - -
Trre8g03807 284 Pfam Protein tyrosine and serine/threonine kinase 176 266 IPR001245 GO:0004672|GO:0006468
Trre8g03807 284 Gene3D Phosphorylase Kinase; domain 1 133 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03807 Trre-Chr8 43336720 43342256 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03807 2 259 Receptor kinase-like Gene Family AT1G55610 31.716 2.90e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Trre8g03807 PK_Tyr_Ser-Thr 3.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03807 - - psat:127106772 317.39