Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03805 ATGCACAAATTGCTACATCCACAGCTGGTGGTGAAAGGAAGCAAAGAGATCTCTATACTAATGGAGAGACTGACTTCAACAATATGGTTGGAAGAACTGCGCGACGCAACCAATTGTTTTTCCGTGGACAATGCCATTGGGGTAGGAAAGATGGGAATGATGTACGAAGGATTTATGCCTAATGGTCAGTTACTAGCTGTTAAGAGACTATTTGACTCTCGGTTATTTAAACGGCAATTCCTTTTGGAAACAGCGATTTTGTGCAAGTACAGACACAAAAATATAGTTCCCCTACTTGGGTTTTGCATTGAAGGAAAGGAAAGGCTTTTGGCATATGCATACATGTCAAATGGAAGGCTTTCCAAATGTTTGCATCCTTTGGAAAGTGAAGTCATAAGATTGAAATGGCATGACAGGATTAAAATTGCACTTGGAATAGCAAGAGGATTATAA 453 0.3974 MHKLLHPQLVVKGSKEISILMERLTSTIWLEELRDATNCFSVDNAIGVGKMGMMYEGFMPNGQLLAVKRLFDSRLFKRQFLLETAILCKYRHKNIVPLLGFCIEGKERLLAYAYMSNGRLSKCLHPLESEVIRLKWHDRIKIALGIARGL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03805 150 Gene3D Phosphorylase Kinase; domain 1 5 114 - -
Trre8g03805 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 150 - -
Trre8g03805 150 ProSiteProfiles Protein kinase domain profile. 40 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03805 150 SUPERFAMILY Protein kinase-like (PK-like) 16 150 IPR011009 -
Trre8g03805 150 Pfam Protein tyrosine and serine/threonine kinase 42 150 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03805 Trre-Chr8 43322645 43324019 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03805 30 150 Strubbelig Receptor Gene Family AT4G22130 39.516 1.12e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Trre8g03805 PK_Tyr_Ser-Thr 4.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03805 - - psat:127106772 247.284