Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03804 ATGAATCCCAACATTGAAGATCATCTAGGGGTGATATTTAAAGTGAATGATGGGAAGAAGGATGTTTATGATTTTGGAAGTGTACTTTTTGAATTGATTACAGGAAAGATGTATAATGAATTATCGCGTTCATATGACACTTATAATATTTGCACTAACCCTTTGAGTTTTTATAATGTAATTGAAAAATCTGTGACTGGGGAAGGACTTGAAAATGAAGTTTGTACTCTCCTAAAGATTGCTTGTGAGTGTGTTCATCCTTTCCCCGAACAAAGGCCAACAATGCTTGAAGTTTACAACAATATGAGCAATGTAAGGAAGGATCGATACGACTATGGTGAAGAATCAGACACATTAAGGGTATTCTAA 369 0.3469 MNPNIEDHLGVIFKVNDGKKDVYDFGSVLFELITGKMYNELSRSYDTYNICTNPLSFYNVIEKSVTGEGLENEVCTLLKIACECVHPFPEQRPTMLEVYNNMSNVRKDRYDYGEESDTLRVF 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03804 122 Gene3D Transferase(Phosphotransferase) domain 1 8 119 - -
Trre8g03804 122 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 105 - -
Trre8g03804 122 SUPERFAMILY Protein kinase-like (PK-like) 17 108 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03804 Trre-Chr8 43322159 43322527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03804 19 117 Receptor kinase-like Gene Family AT1G27190 33.645 6.69e-13 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre8g03804 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03804 - - mtr:112421135 207.608