Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03764 ATGCAGGGAAGTGGAGAATTAACAGTTCCCTCAGGATTCAGGTTCCACCCCACTGATGAGGAGCTTCTTTACTATTATTTAAGGAGGAATGTTTCTTATGACGCCATTGATCTTGATGTTATTAGAGAAGTTGATCTAAATAGACTTGAGCCTTGGGATCTCAAAGGCAGGAATTGGTATAGCAGAGCTAATTGCTCTTTAGATATCAAAACAGCACCTATGGAAGAGAGTCGTAAGCAGATATGGCTGGTAGACTCAAAGGCTTCTCCAAATATAAGTTCTCGTAATCCCACTCTAGCTGGTGCCTTGACAAGGCTTCAGAGGTGTGCATTCAACGGAAGCTGGGAGATTCGAATCATTGCTGCTCAGGCTCTTACAACAATGGCAATTAGATCTGGTGAACCTTTCAGGTTACAGATTTACGAGTTTCTGCACACTTTAGCACAAGGTGGTCTGCAATCACAACTCTCTAATATGCATCTTAGCAATGGAGAAGATCACGGAGCTGGTGGTACAGGTCTTGGAGTTTTATTAAGTCCCATGATAAAGGTTCTGCATGAGATGTATAGTGCACAAGATATATAG 585 0.4222 MQGSGELTVPSGFRFHPTDEELLYYYLRRNVSYDAIDLDVIREVDLNRLEPWDLKGRNWYSRANCSLDIKTAPMEESRKQIWLVDSKASPNISSRNPTLAGALTRLQRCAFNGSWEIRIIAAQALTTMAIRSGEPFRLQIYEFLHTLAQGGLQSQLSNMHLSNGEDHGAGGTGLGVLLSPMIKVLHEMYSAQDI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03764 194 ProSiteProfiles NAC domain profile. 9 143 IPR003441 GO:0003677|GO:0006355
Trre8g03764 194 SUPERFAMILY NAC domain 6 60 IPR036093 GO:0003677|GO:0006355
Trre8g03764 194 Gene3D NAC domain 18 117 IPR036093 GO:0003677|GO:0006355
Trre8g03764 194 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 83 193 - -
Trre8g03764 194 Pfam No apical meristem (NAM) protein 10 58 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03764 Trre-Chr8 42759771 42761607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03764 1 57 NAC Transcription Factor Family AT1G79580 71.930 1.74e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre8g03764 NAM 6.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03764 - - psat:127100469 188.734