Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03761 ATGGAGAGACAAGGAGTGGTTGGGAGAGCTAGAGCACCATTATCCGCGGTAGTGAACAACGCAGAAGGAACCGATTCTAACACCGTTGGGTTCACAAAAGAAGATATTGAGGCATTGCTTATTGAGAAGATGAAAAAGGGGAATCCGTATGATAATAAGAAAAAAATGGACCAGATGGTGGATCTTATTAAGCGGCTTAAGCTTTGTGTTCGATGGTGTGTCGATGAAAATGACAAACTTCATTCTGAAGTAGAGTCTGCTGTTAAAAAGTGCTGCGATACTGAGATGGAAATGAAAAATAAGACTGAGGAGCTGAATGATACTATATCTGATATGAGGAAGACAATTTCTTCCTTAGAAGAGATAAATGTAAAAGAAAAGTTGGAGAAGTCGGTAGCAATTGATGATAATATGAAACTACAGCAGTGTAATAGTAGTCTTCAATCAGATCTCAAATCAGCTAATGAGGCTTATAGACGACTTGAAATGGAGAAATCTATCATAGTTGAGAGCCTTAATGATACAAGAGATCTTAATAAGGAGTTGCAGGATCGATTGAAATCTCTTAAAGATTCACAGAGTGAAGCTATAAAGCATAAAGAAATGCTAGCAAATGAACTTACATGCCTCCGCGAGGAACTAAAAAAAATTACAGAAGATCGTGATCGCATACAAGGACAACTAAATGCTGTAATTTTAGAACGGGAAAAATACATAAAATTTAAATACGAAACATATTCAAAATTGGATAAATTGGCAATTAAAACAGAGGCACTTGAGGAGACTTGTTCCTCTCAAAAGGAGAAAATAAATTTACTGGAGCAAAAGTTACGTGCTGAACGGGAGAAGTTAGAGATGGCTGATTTATCTGCTTTGGAAACAAGAGCAATGTTTGAAGAGCAGAAAAGAATCATACAAGAGCTACGAGATCAGTTGGCAGATAAAGAATTTCAAATAGTTGAAGGAGAAAAGCTAAGGAAAAAACTGCACAACACTGTCTTGGAGCTGAAAGGAAATATTCGCGTATTTTGTCGTGTGCGACCTTTACTACGAGAGGAACGTTCCGAAACGAACATGGTTGTTTCTTACCCAACATCAATGGAAATGCTTGGCCGGGGAATTGAGTTGGTGCAAAATGGACAGAAACAACTTTTTACATTTGACAAGGTATTTAATCATGGCGCCTCTCAGCAGGAAGTTTTCACTGAAATATCACAACTGGTGCAAAGTGCGCTTGATGGCTACAAGGTATGCATTTTTGCTTACGGACAAACGGGTTCAGGAAAAACCTATACAATGATGGGTAGGCCTGACACTCCAGATCTGAAAGGGATGATACCACTTTCTTTAGAACAGATATTCCAGACTAGTCAATCCCTTAAAGACCAGGGCTGGAATTTCAAAATGCAGGCATCAGTGTTGGAAATATATAATGAGACTATCAAGGATTTGTTATTATCAAATCGGTCAAGTGGGTTTGACCAAACACGAGCAGAAAATAGTGTTCACGGAAAACAGTACACTATTAGACATGACAAAAATGGAAACACGCATGTTTTGGACCTCACCATTGTCGATGTTTGTAGTGCTGATGAGATTTCCTCCCTCCTGCAAAAGGCTGCCCAAATCAGGTCAATGGGAAGAACACAAATGAATGAACAATCATCAAGAAGTCACTTTGTCGTTACTTTGCGCATATGTGGTATAAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTCTCAAGGAGTGGGGCCACTGGAGACCGTTTGAAGGAAACTCAGGCTATCAACCAAAGTCTCTCCTCTTTAAGTAATGTCATATTTGCTTTGGCAAAAAAAGAAGAGCATGTTCCTTTTAGGGATTCAAAACTGACGCACTTACTCCAGCCATGTCTTGAAGGGGATTCCAAAACTTTGATGTTTGTCAACATATCACCTGATCAATCTTCAATGGATGAGTCACTTTGCTCACTCCGCTTTGCAGCTAGAGTTAATGCTGTGAAATTGGGGTTTCCCGGTGTGAAACCTAGACATCTACATGGTGCTTAG 2085 0.3928 MERQGVVGRARAPLSAVVNNAEGTDSNTVGFTKEDIEALLIEKMKKGNPYDNKKKMDQMVDLIKRLKLCVRWCVDENDKLHSEVESAVKKCCDTEMEMKNKTEELNDTISDMRKTISSLEEINVKEKLEKSVAIDDNMKLQQCNSSLQSDLKSANEAYRRLEMEKSIIVESLNDTRDLNKELQDRLKSLKDSQSEAIKHKEMLANELTCLREELKKITEDRDRIQGQLNAVILEREKYIKFKYETYSKLDKLAIKTEALEETCSSQKEKINLLEQKLRAEREKLEMADLSALETRAMFEEQKRIIQELRDQLADKEFQIVEGEKLRKKLHNTVLELKGNIRVFCRVRPLLREERSETNMVVSYPTSMEMLGRGIELVQNGQKQLFTFDKVFNHGASQQEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDTPDLKGMIPLSLEQIFQTSQSLKDQGWNFKMQASVLEIYNETIKDLLLSNRSSGFDQTRAENSVHGKQYTIRHDKNGNTHVLDLTIVDVCSADEISSLLQKAAQIRSMGRTQMNEQSSRSHFVVTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINQSLSSLSNVIFALAKKEEHVPFRDSKLTHLLQPCLEGDSKTLMFVNISPDQSSMDESLCSLRFAARVNAVKLGFPGVKPRHLHGA 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03761 694 PANTHER KINESIN-LIKE PROTEIN KLP-3 90 684 IPR027640 GO:0003777|GO:0007018
Trre8g03761 694 Coils Coil 693 694 - -
Trre8g03761 694 Coils Coil 144 164 - -
Trre8g03761 694 ProSitePatterns Kinesin motor domain signature. 579 590 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre8g03761 694 Coils Coil 172 227 - -
Trre8g03761 694 Gene3D Kinesin motor domain 282 681 IPR036961 -
Trre8g03761 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 678 IPR027417 -
Trre8g03761 694 Coils Coil 249 290 - -
Trre8g03761 694 Coils Coil 298 325 - -
Trre8g03761 694 FunFam Kinesin-like protein 285 681 - -
Trre8g03761 694 CDD KISc_C_terminal 337 681 - -
Trre8g03761 694 ProSiteProfiles Kinesin motor domain profile. 339 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03761 694 Coils Coil 102 122 - -
Trre8g03761 694 Pfam Kinesin motor domain 345 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03761 694 SMART kinesin_4 337 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03761 694 PRINTS Kinesin heavy chain signature 580 598 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03761 694 PRINTS Kinesin heavy chain signature 549 566 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03761 694 PRINTS Kinesin heavy chain signature 414 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03761 694 PRINTS Kinesin heavy chain signature 629 650 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03761 Trre-Chr8 42728426 42733929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03761 244 679 Calmodulin-binding Proteins AT5G65930 35.506 3.70e-78 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03761 K10405 - gmx:100818473 886.715