Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03760 ATGGAGAGACAAGGAGTGGTTGGGAGAGCTAGAGCACCATTATCCGCGGTAGTGAACAACGCAGAAGGAACCGATTCTAACACCGTTGGGTTCACAAAAGAAGATATTGAGGCATTGCTTATTGAGAAGATGAAAAAGGGGAATCCGTATGATAATAAGAAAAAAATGGACCAGATGGTGGATCTTATTAAGCGGCTTAAGCTTTGTGTTCGATGGTGTGTCGATGAAAATGACAAACTTCATTCTGAAGTAGAGTCTGCTGTTAAAAAGTGCTGCGATACTGAGATGGAAATGAAAAATAAGACTGAGGAGCTGAATGATACTATATCTGATATGAGGAAGACAATTTCTTCCTTAGAAGAGATAAATGTAAAAGAAAAGTTGGAGAAGTCGGTAGCAATTGATGATAATATGAAACTACAGCAGTGTAATAGTAGTCTTCAATCAGATCTCAAATCAGCTAATGAGGCTTATAGACGACTTGAAATGGAGAAATCTATCATAGTTGAGAGCCTTAATGATACAAGAGATCTTAATAAGGAGTTGCAGGATCGATTGAAATCTCTTAAAGATTCACAGAGTGAAGCTATAAAGCATAAAGAAATGCTAGCAAATGAACTTACATGCCTCCGCGAGGAACTAAAAAAAATTACAGAAGATCGTGATCGCATACAAGGACAACTAAATGCTGTAATTTTAGAACGGGAAAAATACATAAAATTTAAATACGAAACATATTCAAAATTGGATAAATTGGCAATTAAAACAGAGGCACTTGAGGAGACTTGTTCCTCTCAAAAGGAGAAAATAAATTTACTGGAGCAAAAGTTACGTGCTGAACGGGAGAAGTTAGAGATGGCTGATTTATCTGCTTTGGAAACAAGAGCAATGTTTGAAGAGCAGAAAAGAATCATACAAGAGCTACGAGATCAGTTGGCAGATAAAGAATTTCAAATAGTTGAAGGAGAAAAGCTAAGGAAAAAACTGCACAACACTGTCTTGGAGCTGAAAGGAAATATTCGCGTATTTTGTCGTGTGCGACCTTTACTACGAGAGGAACGTTCCGAAACGAACATGGTTGTTTCTTACCCAACATCAATGGAAATGCTTGGCCGGGGAATTGAGTTGGTGCAAAATGCAGGACAGAAACAACTTTTTACATTTGACAAGGTATTTAATCATGGCGCCTCTCAGCAGGAAGTTTTCACTGAAATATCACAACTGGTGCAAAGTGCGCTTGATGGCTACAAGGTATGCATTTTTGCTTACGGACAAACGGGTTCAGGAAAAACCTATACAATGATGGGTAGGCCTGACACTCCAGATCTGAAAGGGATGATACCACTTTCTTTAGAACAGATATTCCAGACTAGTCAATCCCTTAAAGACCAGGGCTGGAATTTCAAAATGCAGGCATCAGTGTTGGAAATATATAATGAGACTATCAAGGATTTGTTATTATCAAATCGGTCAAGTGGGTTTGACCAAACACGAGCAGAAAATAGTGTTCACGGAAAACAGTACACTATTAGACATGACAAAAATGGAAACACGCATGTTTTGGACCTCACCATTGTCGATGTTTGTAGTGCTGATGAGATTTCCTCCCTCCTGCAAAAGGCTGCCCAAATCAGGTCAATGGGAAGAACACAAATGAATGAACAATCATCAAGAAGTCACTTTGTCGTTACTTTGCGCATATGTGGTATAAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTCTCAAGGAGTGGGGCCACTGGAGACCGTTTGAAGGAAACTCAGGCTATCAACCAAAGTCTCTCCTCTTTAAGTAATGTCATATTTGCTTTGGCAAAAAAAGAAGAGCATGTTCCTTTTAGGGATTCAAAACTGACGCACTTACTCCAGCCATGTCTTGAAGGGGATTCCAAAACTTTGATGTTTGTCAACATATCACCTGATCAATCTTCAATGGATGAGTCACTTTGCTCACTCCGCTTTGCAGCTAGAGTTAATGCTGTGAAATTGGGGTTTCCCGGTGTGAAACCTAGACATCTACATGGTGCTTAG 2088 0.3932 MERQGVVGRARAPLSAVVNNAEGTDSNTVGFTKEDIEALLIEKMKKGNPYDNKKKMDQMVDLIKRLKLCVRWCVDENDKLHSEVESAVKKCCDTEMEMKNKTEELNDTISDMRKTISSLEEINVKEKLEKSVAIDDNMKLQQCNSSLQSDLKSANEAYRRLEMEKSIIVESLNDTRDLNKELQDRLKSLKDSQSEAIKHKEMLANELTCLREELKKITEDRDRIQGQLNAVILEREKYIKFKYETYSKLDKLAIKTEALEETCSSQKEKINLLEQKLRAEREKLEMADLSALETRAMFEEQKRIIQELRDQLADKEFQIVEGEKLRKKLHNTVLELKGNIRVFCRVRPLLREERSETNMVVSYPTSMEMLGRGIELVQNAGQKQLFTFDKVFNHGASQQEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDTPDLKGMIPLSLEQIFQTSQSLKDQGWNFKMQASVLEIYNETIKDLLLSNRSSGFDQTRAENSVHGKQYTIRHDKNGNTHVLDLTIVDVCSADEISSLLQKAAQIRSMGRTQMNEQSSRSHFVVTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINQSLSSLSNVIFALAKKEEHVPFRDSKLTHLLQPCLEGDSKTLMFVNISPDQSSMDESLCSLRFAARVNAVKLGFPGVKPRHLHGA 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03760 695 CDD KISc_C_terminal 337 682 - -
Trre8g03760 695 SMART kinesin_4 337 688 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03760 695 PANTHER KINESIN-LIKE PROTEIN KLP-3 90 685 IPR027640 GO:0003777|GO:0007018
Trre8g03760 695 ProSitePatterns Kinesin motor domain signature. 580 591 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre8g03760 695 PRINTS Kinesin heavy chain signature 415 436 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03760 695 PRINTS Kinesin heavy chain signature 630 651 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03760 695 PRINTS Kinesin heavy chain signature 550 567 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03760 695 PRINTS Kinesin heavy chain signature 581 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03760 695 FunFam Kinesin-like protein 285 682 - -
Trre8g03760 695 Coils Coil 144 164 - -
Trre8g03760 695 Coils Coil 172 227 - -
Trre8g03760 695 Coils Coil 298 325 - -
Trre8g03760 695 Coils Coil 249 290 - -
Trre8g03760 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 679 IPR027417 -
Trre8g03760 695 Pfam Kinesin motor domain 345 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03760 695 Gene3D Kinesin motor domain 282 682 IPR036961 -
Trre8g03760 695 ProSiteProfiles Kinesin motor domain profile. 339 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03760 695 Coils Coil 102 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03760 Trre-Chr8 42728426 42733929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03760 244 680 Calmodulin-binding Proteins AT5G65930 36.156 6.49e-78 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03760 K10405 - gmx:100818473 882.093