Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03759 ATGGCTTCTCGGAACCAGAACAAACCTCCTCACAGCCACTCCAACAGAAAAGTTGGTTCTGAAGAATTCGCCACAAACAGGCGTCTAAGTATTGATATTGAAGCTGAAAAGATGGAGAGACAAGGAGTGGTTGGGAGAGCTAGAGCACCATTATCCGCGGTAGTGAACAACGCAGAAGGAACCGATTCTAACACCGTTGGGTTCACAAAAGAAGATATTGAGGCATTGCTTATTGAGAAGATGAAAAAGGGGAATCCGTATGATAATAAGAAAAAAATGGACCAGATGGTGGATCTTATTAAGCGGCTTAAGCTTTGTGTTCGATGGTGTGTCGATGAAAATGACAAACTTCATTCTGAAGTAGAGTCTGCTGTTAAAAAGTGCTGCGATACTGAGATGGAAATGAAAAATAAGACTGAGGAGCTGAATGATACTATATCTGATATGAGGAAGACAATTTCTTCCTTAGAAGAGATAAATGTAAAAGAAAAGTTGGAGAAGTCGGTAGCAATTGATGATAATATGAAACTACAGCAGTGTAATAGTAGTCTTCAATCAGATCTCAAATCAGCTAATGAGGCTTATAGACGACTTGAAATGGAGAAATCTATCATAGTTGAGAGCCTTAATGATACAAGAGATCTTAATAAGGAGTTGCAGGATCGATTGAAATCTCTTAAAGATTCACAGAGTGAAGCTATAAAGCATAAAGAAATGCTAGCAAATGAACTTACATGCCTCCGCGAGGAACTAAAAAAAATTACAGAAGATCGTGATCGCATACAAGGACAACTAAATGCTGTAATTTTAGAACGGGAAAAATACATAAAATTTAAATACGAAACATATTCAAAATTGGATAAATTGGCAATTAAAACAGAGGCACTTGAGGAGACTTGTTCCTCTCAAAAGGAGAAAATAAATTTACTGGAGCAAAAGTTACGTGCTGAACGGGAGAAGTTAGAGATGGCTGATTTATCTGCTTTGGAAACAAGAGCAATGTTTGAAGAGCAGAAAAGAATCATACAAGAGCTACGAGATCAGTTGGCAGATAAAGAATTTCAAATAGTTGAAGGAGAAAAGCTAAGGAAAAAACTGCACAACACTGTCTTGGAGCTGAAAGGAAATATTCGCGTATTTTGTCGTGTGCGACCTTTACTACGAGAGGAACGTTCCGAAACGAACATGGTTGTTTCTTACCCAACATCAATGGAAATGCTTGGCCGGGGAATTGAGTTGGTGCAAAATGGACAGAAACAACTTTTTACATTTGACAAGGTATTTAATCATGGCGCCTCTCAGCAGGAAGTTTTCACTGAAATATCACAACTGGTGCAAAGTGCGCTTGATGGCTACAAGGTATGCATTTTTGCTTACGGACAAACGGGTTCAGGAAAAACCTATACAATGATGGGTAGGCCTGACACTCCAGATCTGAAAGGGATGATACCACTTTCTTTAGAACAGATATTCCAGACTAGTCAATCCCTTAAAGACCAGGGCTGGAATTTCAAAATGCAGGCATCAGTGTTGGAAATATATAATGAGACTATCAAGGATTTGTTATTATCAAATCGGTCAAGTGGGTTTGACCAAACACGAGCAGAAAATAGTGTTCACGGAAAACAGTACACTATTAGACATGACAAAAATGGAAACACGCATGTTTTGGACCTCACCATTGTCGATGTTTGTAGTGCTGATGAGATTTCCTCCCTCCTGCAAAAGGCTGCCCAAATCAGGTCAATGGGAAGAACACAAATGAATGAACAATCATCAAGAAGTCACTTTGTCGTTACTTTGCGCATATGTGGTATAAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTCTCAAGGAGTGGGGCCACTGGAGACCGTTTGAAGGAAACTCAGGCTATCAACCAAAGTCTCTCCTCTTTAAGTAATGTCATATTTGCTTTGGCAAAAAAAGAAGAGCATGTTCCTTTTAGGGATTCAAAACTGACGCACTTACTCCAGCCATGTCTTGAAGGGGATTCCAAAACTTTGATGTTTGTCAACATATCACCTGATCAATCTTCAATGGATGAGTCACTTTGCTCACTCCGCTTTGCAGCTAGAGTTAATGCTGTGAAATTGGGGTTTCCCGGTGTGAAACCTAGACATCTACATGGTGCTTAG 2196 0.3953 MASRNQNKPPHSHSNRKVGSEEFATNRRLSIDIEAEKMERQGVVGRARAPLSAVVNNAEGTDSNTVGFTKEDIEALLIEKMKKGNPYDNKKKMDQMVDLIKRLKLCVRWCVDENDKLHSEVESAVKKCCDTEMEMKNKTEELNDTISDMRKTISSLEEINVKEKLEKSVAIDDNMKLQQCNSSLQSDLKSANEAYRRLEMEKSIIVESLNDTRDLNKELQDRLKSLKDSQSEAIKHKEMLANELTCLREELKKITEDRDRIQGQLNAVILEREKYIKFKYETYSKLDKLAIKTEALEETCSSQKEKINLLEQKLRAEREKLEMADLSALETRAMFEEQKRIIQELRDQLADKEFQIVEGEKLRKKLHNTVLELKGNIRVFCRVRPLLREERSETNMVVSYPTSMEMLGRGIELVQNGQKQLFTFDKVFNHGASQQEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDTPDLKGMIPLSLEQIFQTSQSLKDQGWNFKMQASVLEIYNETIKDLLLSNRSSGFDQTRAENSVHGKQYTIRHDKNGNTHVLDLTIVDVCSADEISSLLQKAAQIRSMGRTQMNEQSSRSHFVVTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINQSLSSLSNVIFALAKKEEHVPFRDSKLTHLLQPCLEGDSKTLMFVNISPDQSSMDESLCSLRFAARVNAVKLGFPGVKPRHLHGA 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03759 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 715 IPR027417 -
Trre8g03759 731 ProSiteProfiles Kinesin motor domain profile. 376 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03759 731 ProSitePatterns Kinesin motor domain signature. 616 627 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre8g03759 731 SMART kinesin_4 374 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03759 731 Pfam Kinesin motor domain 382 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03759 731 FunFam Kinesin-like protein 322 718 - -
Trre8g03759 731 Coils Coil 139 159 - -
Trre8g03759 731 Gene3D Kinesin motor domain 321 718 IPR036961 -
Trre8g03759 731 Coils Coil 335 362 - -
Trre8g03759 731 Coils Coil 286 327 - -
Trre8g03759 731 Coils Coil 209 264 - -
Trre8g03759 731 PRINTS Kinesin heavy chain signature 617 635 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03759 731 PRINTS Kinesin heavy chain signature 666 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03759 731 PRINTS Kinesin heavy chain signature 451 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03759 731 PRINTS Kinesin heavy chain signature 586 603 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03759 731 MobiDBLite consensus disorder prediction 1 23 - -
Trre8g03759 731 Coils Coil 181 201 - -
Trre8g03759 731 CDD KISc_C_terminal 374 718 - -
Trre8g03759 731 PANTHER KINESIN-LIKE PROTEIN KLP-3 96 721 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03759 Trre-Chr8 42728225 42733929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03759 281 716 Calmodulin-binding Proteins AT5G65930 35.506 7.53e-78 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03759 K10405 - gmx:100818473 909.827