Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03758 ATGGCTTCTCGGAACCAGAACAAACCTCCTCACAGCCACTCCAACAGAAAAGTTGGTTCTGAAGAATTCGCCACAAACAGGCGTCTAAGTATTGATATTGAAGCTGAAAAGATGGAGAGACAAGGAGTGGTTGGGAGAGCTAGAGCACCATTATCCGCGGTAGTGAACAACGCAGAAGGAACCGATTCTAACACCGTTGGGTTCACAAAAGAAGATATTGAGGCATTGCTTATTGAGAAGATGAAAAAGGGGAATCCGTATGATAATAAGAAAAAAATGGACCAGATGGTGGATCTTATTAAGCGGCTTAAGCTTTGTGTTCGATGGTGTGTCGATGAAAATGACAAACTTCATTCTGAAGTAGAGTCTGCTGTTAAAAAGTGCTGCGATACTGAGATGGAAATGAAAAATAAGACTGAGGAGCTGAATGATACTATATCTGATATGAGGAAGACAATTTCTTCCTTAGAAGAGATAAATGTAAAAGAAAAGTTGGAGAAGTCGGTAGCAATTGATGATAATATGAAACTACAGCAGTGTAATAGTAGTCTTCAATCAGATCTCAAATCAGCTAATGAGGCTTATAGACGACTTGAAATGGAGAAATCTATCATAGTTGAGAGCCTTAATGATACAAGAGATCTTAATAAGGAGTTGCAGGATCGATTGAAATCTCTTAAAGATTCACAGAGTGAAGCTATAAAGCATAAAGAAATGCTAGCAAATGAACTTACATGCCTCCGCGAGGAACTAAAAAAAATTACAGAAGATCGTGATCGCATACAAGGACAACTAAATGCTGTAATTTTAGAACGGGAAAAATACATAAAATTTAAATACGAAACATATTCAAAATTGGATAAATTGGCAATTAAAACAGAGGCACTTGAGGAGACTTGTTCCTCTCAAAAGGAGAAAATAAATTTACTGGAGCAAAAGTTACGTGCTGAACGGGAGAAGTTAGAGATGGCTGATTTATCTGCTTTGGAAACAAGAGCAATGTTTGAAGAGCAGAAAAGAATCATACAAGAGCTACGAGATCAGTTGGCAGATAAAGAATTTCAAATAGTTGAAGGAGAAAAGCTAAGGAAAAAACTGCACAACACTGTCTTGGAGCTGAAAGGAAATATTCGCGTATTTTGTCGTGTGCGACCTTTACTACGAGAGGAACGTTCCGAAACGAACATGGTTGTTTCTTACCCAACATCAATGGAAATGCTTGGCCGGGGAATTGAGTTGGTGCAAAATGCAGGACAGAAACAACTTTTTACATTTGACAAGGTATTTAATCATGGCGCCTCTCAGCAGGAAGTTTTCACTGAAATATCACAACTGGTGCAAAGTGCGCTTGATGGCTACAAGGTATGCATTTTTGCTTACGGACAAACGGGTTCAGGAAAAACCTATACAATGATGGGTAGGCCTGACACTCCAGATCTGAAAGGGATGATACCACTTTCTTTAGAACAGATATTCCAGACTAGTCAATCCCTTAAAGACCAGGGCTGGAATTTCAAAATGCAGGCATCAGTGTTGGAAATATATAATGAGACTATCAAGGATTTGTTATTATCAAATCGGTCAAGTGGGTTTGACCAAACACGAGCAGAAAATAGTGTTCACGGAAAACAGTACACTATTAGACATGACAAAAATGGAAACACGCATGTTTTGGACCTCACCATTGTCGATGTTTGTAGTGCTGATGAGATTTCCTCCCTCCTGCAAAAGGCTGCCCAAATCAGGTCAATGGGAAGAACACAAATGAATGAACAATCATCAAGAAGTCACTTTGTCGTTACTTTGCGCATATGTGGTATAAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTCTCAAGGAGTGGGGCCACTGGAGACCGTTTGAAGGAAACTCAGGCTATCAACCAAAGTCTCTCCTCTTTAAGTAATGTCATATTTGCTTTGGCAAAAAAAGAAGAGCATGTTCCTTTTAGGGATTCAAAACTGACGCACTTACTCCAGCCATGTCTTGAAGGGGATTCCAAAACTTTGATGTTTGTCAACATATCACCTGATCAATCTTCAATGGATGAGTCACTTTGCTCACTCCGCTTTGCAGCTAGAGTTAATGCTGTGAAATTGGGGTTTCCCGGTGTGAAACCTAGACATCTACATGGTGCTTAG 2199 0.3956 MASRNQNKPPHSHSNRKVGSEEFATNRRLSIDIEAEKMERQGVVGRARAPLSAVVNNAEGTDSNTVGFTKEDIEALLIEKMKKGNPYDNKKKMDQMVDLIKRLKLCVRWCVDENDKLHSEVESAVKKCCDTEMEMKNKTEELNDTISDMRKTISSLEEINVKEKLEKSVAIDDNMKLQQCNSSLQSDLKSANEAYRRLEMEKSIIVESLNDTRDLNKELQDRLKSLKDSQSEAIKHKEMLANELTCLREELKKITEDRDRIQGQLNAVILEREKYIKFKYETYSKLDKLAIKTEALEETCSSQKEKINLLEQKLRAEREKLEMADLSALETRAMFEEQKRIIQELRDQLADKEFQIVEGEKLRKKLHNTVLELKGNIRVFCRVRPLLREERSETNMVVSYPTSMEMLGRGIELVQNAGQKQLFTFDKVFNHGASQQEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDTPDLKGMIPLSLEQIFQTSQSLKDQGWNFKMQASVLEIYNETIKDLLLSNRSSGFDQTRAENSVHGKQYTIRHDKNGNTHVLDLTIVDVCSADEISSLLQKAAQIRSMGRTQMNEQSSRSHFVVTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINQSLSSLSNVIFALAKKEEHVPFRDSKLTHLLQPCLEGDSKTLMFVNISPDQSSMDESLCSLRFAARVNAVKLGFPGVKPRHLHGA 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03758 732 ProSiteProfiles Kinesin motor domain profile. 376 717 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03758 732 SMART kinesin_4 374 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03758 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 716 IPR027417 -
Trre8g03758 732 CDD KISc_C_terminal 374 719 - -
Trre8g03758 732 PANTHER KINESIN-LIKE PROTEIN KLP-3 96 722 IPR027640 GO:0003777|GO:0007018
Trre8g03758 732 ProSitePatterns Kinesin motor domain signature. 617 628 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre8g03758 732 FunFam Kinesin-like protein 322 719 - -
Trre8g03758 732 Coils Coil 139 159 - -
Trre8g03758 732 Pfam Kinesin motor domain 382 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03758 732 Gene3D Kinesin motor domain 321 719 IPR036961 -
Trre8g03758 732 Coils Coil 335 362 - -
Trre8g03758 732 Coils Coil 286 327 - -
Trre8g03758 732 Coils Coil 209 264 - -
Trre8g03758 732 PRINTS Kinesin heavy chain signature 452 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03758 732 PRINTS Kinesin heavy chain signature 587 604 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03758 732 PRINTS Kinesin heavy chain signature 667 688 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03758 732 PRINTS Kinesin heavy chain signature 618 636 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g03758 732 MobiDBLite consensus disorder prediction 1 23 - -
Trre8g03758 732 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03758 Trre-Chr8 42728225 42733929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03758 281 717 Calmodulin-binding Proteins AT5G65930 36.156 1.24e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03758 K10405 - gmx:100818473 905.205