Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03751 ATGAGCAGTACTCTCTTGATTTTGGTAATAGGAATATGCACAGGCTTTGTGTTTGGAGCCGGTTTAGCATTTTCAATTTTATTCTGCTTCATGTTTAGAAAGAATCGTGTAGATGTGGAGAAGAGCGGTCCTATGAGATCTGCGGTCGTTACTCTTCAAGTCAAAGAGGCTGATTCCAGCTTATCAGACCCCAATGTGGCTTTCGAGTCACCAAGAACATCGGAATGGAGTAACACAGCTTTATGGTTAGAAGGACTTAGGAAGAAGAATGCAGCATGTGGAATTCCCAAGTATTCTTACAAAGAAATAGAAAAGGCTACTTCAAATTTCACAACAATCATAGGCAATGGAGCATTTGGCTCTGTTTATAAAGCAGTCATGTCTACAGGCGAGACGGTTGCAGTTAAAGTTCTTGGTGCTAATTCAAGACAAGGAGAACAAGAATTTTTAACTGAGGTCTTATTACTTGGAAGGTTACACCACAAAAATCTTGTGGGTTTGGTGGGATATGCTGCGGAAAGAGGACAGCATATGCTCCTTTACAATTACATGAGCAATGGCTGTCTTGCTTCTCATTTGTATGGCGATAATCATGAGCGGTTGAGCTGGGATTTGAGATTTAACGTAGCGCTAGATGTTGCAATGGTGCTGGAATATCTACATTATGGGGCGGATCCACCTGTTGTGCACCGTGACATCAAGTCCTCTAACATTCTATTGGACCAATTTATGAAAGCCAAGATCACCGACTTTGGCCTTTCGAGACCAGAGATGACTAAACCTCGTTTGTCAAACGTCAGAGGAACTTTTGGATATCTTGATCCCGAGAATCCACAGCAGGGCCTCATGGAATATGTAAAACTAGCTACCATGGAAAGCGACGGCAAGAATGGATGGGAAGAAATTGTGGATCCGGTACTGAAAGGAAACTATGATGTACATAAGCTTAATGATATGGCTTCACTTGCATTCAAATGTGTCAATGAGATCTCCAAAATTCGACCATCAATGAGGGAAATCGTTCAAGCATTATCTCAACTTTATAAGAAGCCTAATATAAATTCTAACCGAGCATCTTCTTCTACGTTAAGCAAATCTCCTTCTGCGTTATATGAAGTGTCCCTTGAAGTGAAACAGTCAGAGGATCTGCGCAGATTGCATAGCCGATAA 1170 0.4145 MSSTLLILVIGICTGFVFGAGLAFSILFCFMFRKNRVDVEKSGPMRSAVVTLQVKEADSSLSDPNVAFESPRTSEWSNTALWLEGLRKKNAACGIPKYSYKEIEKATSNFTTIIGNGAFGSVYKAVMSTGETVAVKVLGANSRQGEQEFLTEVLLLGRLHHKNLVGLVGYAAERGQHMLLYNYMSNGCLASHLYGDNHERLSWDLRFNVALDVAMVLEYLHYGADPPVVHRDIKSSNILLDQFMKAKITDFGLSRPEMTKPRLSNVRGTFGYLDPENPQQGLMEYVKLATMESDGKNGWEEIVDPVLKGNYDVHKLNDMASLAFKCVNEISKIRPSMREIVQALSQLYKKPNINSNRASSSTLSKSPSALYEVSLEVKQSEDLRRLHSR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03751 389 Gene3D Phosphorylase Kinase; domain 1 76 183 - -
Trre8g03751 389 ProSiteProfiles Protein kinase domain profile. 108 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03751 389 ProSitePatterns Protein kinases ATP-binding region signature. 114 136 IPR017441 GO:0005524
Trre8g03751 389 SMART serkin_6 108 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03751 389 SUPERFAMILY Protein kinase-like (PK-like) 94 344 IPR011009 -
Trre8g03751 389 Gene3D Transferase(Phosphotransferase) domain 1 282 364 - -
Trre8g03751 389 FunFam serine/threonine-protein kinase PBS1-like 82 183 - -
Trre8g03751 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Trre8g03751 389 Pfam Protein kinase domain 112 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03751 389 Gene3D Transferase(Phosphotransferase) domain 1 184 281 - -
Trre8g03751 389 PANTHER OS01G0750732 PROTEIN 23 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03751 Trre-Chr8 42688029 42690339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03751 94 344 Receptor kinase-like Gene Family AT3G19300 38.516 5.80e-59 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Trre8g03751 Pkinase 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03751 - - lang:109332283 497.278