Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03744 ATGACCAAAGATAGCGTTATTGAAGATGCTATTACTTATACCAAGAAGCTTCAATATGAAGTTGACTATCTTACACAAGAGCTTTGTGCAATGCAAGAAGAAGAAAAGTTAGAGGAAAGAGCAGAGCCAAAAATAAATGAATTTTCTGCTGCTGAAGAGATGAAGAATTGGGGGATACAGGAAGAAGTTCAAGTGGAAAAAATTAGTGAAAATAAGCTCTGGATTAAGATAATCATTGAGAAAAATACAGGGAGGTTTATGAAATTAATGGAGACTATGAATGGTTTAGGCATTGAAATGATAGAAGCCAATGTTACAACCATAAAAGGAGCATATTTGATTATAACTTCTATTAAGGGTATTGGTTTTGATATAGATCAAGCAAAACATTTGTTGGCAGATATAATTAAAAGTATTTAG 420 0.3214 MTKDSVIEDAITYTKKLQYEVDYLTQELCAMQEEEKLEERAEPKINEFSAAEEMKNWGIQEEVQVEKISENKLWIKIIIEKNTGRFMKLMETMNGLGIEMIEANVTTIKGAYLIITSIKGIGFDIDQAKHLLADIIKSI 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03744 139 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03744 Trre-Chr8 42574984 42575810 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03744 1 138 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 41.379 4.23e-27 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03744 - - tpra:123918158 232.261