Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03734 ATGACGCGGCAATTAGACCAAGATTCCTCTGAAGAAGTGAATGGCGCTCAAAGCAACGCACATCCAAATCTACCCTTTTTCAGCTTTAAAACGATAATGACAGCTACAAGAAATTGTGATCATGAGCATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTATCCAAACATTCGGGTCAAGGCAAACAAGAGTTTAAAAATGAAGTTACACTTTTAGTTAAACTTCAACACAGAAATCTAGTGAGATTGATTGGTTGTTGCTTTGAAAAAGAAGAAAGAATGCTAGTTTATGAATATCTACCAAACAAAAGCCTAGACTTCTTCATATTCGATAAAAACCAAAAGTCGTCATTGGATTGGGGAGCGTTTTGA 417 0.3741 MTRQLDQDSSEEVNGAQSNAHPNLPFFSFKTIMTATRNCDHEHKLGQGGFGSVYKGCLVNGQEIAVKRLSKHSGQGKQEFKNEVTLLVKLQHRNLVRLIGCCFEKEERMLVYEYLPNKSLDFFIFDKNQKSSLDWGAF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03734 138 Gene3D Phosphorylase Kinase; domain 1 11 114 - -
Trre8g03734 138 MobiDBLite consensus disorder prediction 1 20 - -
Trre8g03734 138 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 136 - -
Trre8g03734 138 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 114 - -
Trre8g03734 138 Pfam Protein tyrosine and serine/threonine kinase 42 130 IPR001245 GO:0004672|GO:0006468
Trre8g03734 138 ProSiteProfiles Protein kinase domain profile. 39 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03734 138 ProSitePatterns Protein kinases ATP-binding region signature. 45 67 IPR017441 GO:0005524
Trre8g03734 138 SUPERFAMILY Protein kinase-like (PK-like) 17 130 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03734 Trre-Chr8 42487188 42488391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03734 27 135 Receptor kinase-like Gene Family AT4G11480 60.550 2.85e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g03734 PK_Tyr_Ser-Thr 3.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03734 - - tpra:123914659 258.84