Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03732 ATGGCCAGAAGTTCTGATGATGAACCTGTGCTATTAATGGCTTATGAATCTGATGATGATGAACCTGTGAAGTTGACGTTTTCTGATTCTGAAGAAGTTTCAGAAGATGATTATGAAATTGGAGTCAGACTCTATGACTCAGAGTCAGAATCTGAGGTTTCTGAAGATGAGTCAGAGTCAGAAGATGACTCTGAAGATGAAGGAGATTCTGAAGGATCAGACTCTGAAGGATCAGACTCTGAAGGTTCAGACTCTGAAGGTGACTCTGAAGGAGATTCTGAAGGTTCAGAAGATGAAGAAAGTCAAGGTTCTGAAGGAGGAAGAACTTCTGATAACATTTCAGATGCAAGAGCTTCTGAAGGTGAAACTTCTGGGTCTCCAACTTCTGAAGAAGAAGAAGACCTTGAAGGCAAGTCTGATTCTGAATCAGATGGTGGTGATGATTCAGATGGTGCATCTGATTCTGATCCAGAATCTAGTGGTGATTCAGATGGTAGTGATCCAGATTCTGAAGACGTAGGTTCTGGAGGACAAGCTTCTGAATTTGATCATGCCTTTGGAGGAAATCATGACTTTGAAGGTGGACCTTCTGAAGGAGGAGCTTCTAAAGGTAGTCCAGCCTCTAACAATGGTCATGTTTCTAAAGGTGAAACTTCTGAAGGCAGAGTTTCTGGGAGTATTCAAGACTCTGGTGGTCAAGACTCTGAAGGTGGAGCTTCTGGAGTGGGTTGTCCAGCATCTGATACTGTTCCAGAACTGGAAGAAGATTGTGACTCTGGAATAGACTATGGAGTAAGTTCTGGTGTCCAAGGTTCTGAAGAGACAAGTTCTGAGGTCCGAAGTTCTGAATTTGTTACTACAGAAGAAATTCTCGAGAAGCAAGTCTGGTTGCAGGCCATGACAGAAGAACTTGAGACTCTGAGAAACAACTGTGTGTGGAACCAAGAAAAGGAGTTGGGGCAGCAGCTTGGTTATAGAGCTTTGAGTCTATGGCTTGAATGGAGTTTAGTCCAACGTGAATATTCTGGGAAGTCCACCTCTCGCTATGTAGGAATTTGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAACAGAGATAGTCCAATCAACGACACTTCTGGAATCCTATCAATCGACTCAAATGGAAATCTAGTACTCAACAACAACCTTAGCACCATTCCTATTTGGTCTACCAATGTTTCATTACCTCAATATCAAAGAAATAGCACCAGTGTTACAGCTCAACTATCGGATATAGCAAACCTAGTTTTGATGCTAAACAACACCACCAAAACTGTCATATGGGAAAGCTTTGATCATCCAACAGACACCATGCTTCCATATCTAAGGCTTGGTTTTGATAGAAAAACTAATCAAAGTTGGTCCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAAAGATGATGACTATGTAGCACTCTCATATTACACGTATGATAAGTCTATCATATCTAGGATAGTTGTTCAACAATCTGGGTTCTCACAAACATTCACATGGGACAGTCAAAAGAGTCAATGGATCCGGTATTGGTCTGACCCAAATAATCCATGTGATAACTATGGAACATGTGGATCAAACAGCAATTGTGACCCTTCGAACTTTGAGGACTTTAAGTGTACTTGTTTACCTGGTTTTGAACCCAAATTTCCACGTGATTGGTATCAGAGTATAGATGGGTCAGGAGGGTGTGTAAGAAAGAAAGGTGTATCTGATTGTAGGAATGGAGAAGGGTTTGTCAAAGTTGAAAGCTTGAAAGTTCCTGATACATCTGTGGCAGTTGCTAAAGATGGTTTGAGTTTGGAAGAATGTGAGAAAGAATGCTTTAGAAACTGCTCTTGTACTGCCTATGCAGTTGCTGATGTGAGGAATGGTGGAAGTGGATGTTTGACATGGCACGGAAATTTAACAGACATTCAAAAACTTAGTGATCAAGGCCAAGATTTATATTTACGTGTCGATAAAGTTGAACTAGCCAATTACTATAAAAAAGGCAAAGGAGTCCTTGATAAAAAGCGGTTGTCTGCAATTCTTGTAGCTTCTATAGTTGCTATTATCATCATCCTCACCAGTGCAAATTACCTGTGGAAGAAAAAAAGAAAGGATGATATGATGCGGCAATTAAACCAAGAATCCTCTGGAGAAGAGAATGGTGCTCAAAGCAACACAAATCCAAATTTACCGTTTTTCAACTTTAAAACGATAATGACAGCTACAAGAAATTGCGGTCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTATCAAAACATTCGGTTCAAGGAAAAGAAGATGGATATATGTCACCAGAATATGCAATGGAAGGATGTTATTCAACAAAATCTGATGTCTTCAGTTATGGTGTCTTACTACTGGAGATTATTGCTGGCCAAAAAAACACACATTGTGAAAGAAGAGCCTCCCCAAATTTAATTGGACATGTGTGGATACTATGGACAGAAGGAAGAGCCTTGGATACAGTTGATCTGACCCTAAACCAGTCTTATCCTTATGCTATAGTTATGAGATGCATTCAAATTGGACTTTTGTGTGTTCAAGAAAATGCCATGAATAGACCAACAATGACAGAAGTTGTTTTCATGCTATGCAATGAAACACCTCTTTGTCAACCTCAAAAACCAGCATTCTTATTCAATGGCAAACAAGATTTGCAAGAGTCATCAACATCAAGAGGAGGATCTTCAATAAATGAAATAACAGAAACTATTATCAGTGCTCGCTAA 2826 0.4002 MARSSDDEPVLLMAYESDDDEPVKLTFSDSEEVSEDDYEIGVRLYDSESESEVSEDESESEDDSEDEGDSEGSDSEGSDSEGSDSEGDSEGDSEGSEDEESQGSEGGRTSDNISDARASEGETSGSPTSEEEEDLEGKSDSESDGGDDSDGASDSDPESSGDSDGSDPDSEDVGSGGQASEFDHAFGGNHDFEGGPSEGGASKGSPASNNGHVSKGETSEGRVSGSIQDSGGQDSEGGASGVGCPASDTVPELEEDCDSGIDYGVSSGVQGSEETSSEVRSSEFVTTEEILEKQVWLQAMTEELETLRNNCVWNQEKELGQQLGYRALSLWLEWSLVQREYSGKSTSRYVGIWYNNLPIQTVVWVANRDSPINDTSGILSIDSNGNLVLNNNLSTIPIWSTNVSLPQYQRNSTSVTAQLSDIANLVLMLNNTTKTVIWESFDHPTDTMLPYLRLGFDRKTNQSWSLQSWKTDDDPGKDDDYVALSYYTYDKSIISRIVVQQSGFSQTFTWDSQKSQWIRYWSDPNNPCDNYGTCGSNSNCDPSNFEDFKCTCLPGFEPKFPRDWYQSIDGSGGCVRKKGVSDCRNGEGFVKVESLKVPDTSVAVAKDGLSLEECEKECFRNCSCTAYAVADVRNGGSGCLTWHGNLTDIQKLSDQGQDLYLRVDKVELANYYKKGKGVLDKKRLSAILVASIVAIIIILTSANYLWKKKRKDDMMRQLNQESSGEENGAQSNTNPNLPFFNFKTIMTATRNCGHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKHSVQGKEDGYMSPEYAMEGCYSTKSDVFSYGVLLLEIIAGQKNTHCERRASPNLIGHVWILWTEGRALDTVDLTLNQSYPYAIVMRCIQIGLLCVQENAMNRPTMTEVVFMLCNETPLCQPQKPAFLFNGKQDLQESSTSRGGSSINEITETIISAR 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03732 941 MobiDBLite consensus disorder prediction 265 283 - -
Trre8g03732 941 SUPERFAMILY Protein kinase-like (PK-like) 730 787 IPR011009 -
Trre8g03732 941 SUPERFAMILY alpha-D-mannose-specific plant lectins 362 475 IPR036426 -
Trre8g03732 941 MobiDBLite consensus disorder prediction 50 100 - -
Trre8g03732 941 MobiDBLite consensus disorder prediction 17 49 - -
Trre8g03732 941 Gene3D Hepatocyte Growth Factor 581 661 - -
Trre8g03732 941 MobiDBLite consensus disorder prediction 126 169 - -
Trre8g03732 941 MobiDBLite consensus disorder prediction 716 735 - -
Trre8g03732 941 Gene3D - 351 490 - -
Trre8g03732 941 Pfam D-mannose binding lectin 361 470 IPR001480 -
Trre8g03732 941 CDD PAN_AP_plant 581 663 - -
Trre8g03732 941 SMART ntp_6 584 663 IPR003609 -
Trre8g03732 941 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 345 887 - -
Trre8g03732 941 ProSiteProfiles EGF-like domain profile. 524 562 IPR000742 -
Trre8g03732 941 Gene3D Transferase(Phosphotransferase) domain 1 797 897 - -
Trre8g03732 941 MobiDBLite consensus disorder prediction 1 283 - -
Trre8g03732 941 SUPERFAMILY Protein kinase-like (PK-like) 793 907 IPR011009 -
Trre8g03732 941 MobiDBLite consensus disorder prediction 720 735 - -
Trre8g03732 941 MobiDBLite consensus disorder prediction 106 125 - -
Trre8g03732 941 SMART blect_4 321 444 IPR001480 -
Trre8g03732 941 Pfam Protein tyrosine and serine/threonine kinase 794 894 IPR001245 GO:0004672|GO:0006468
Trre8g03732 941 Pfam PAN-like domain 583 649 IPR003609 -
Trre8g03732 941 ProSiteProfiles PAN/Apple domain profile. 583 664 IPR003609 -
Trre8g03732 941 Pfam S-locus glycoprotein domain 478 560 IPR000858 GO:0048544
Trre8g03732 941 Gene3D Phosphorylase Kinase; domain 1 726 796 - -
Trre8g03732 941 ProSiteProfiles Bulb-type lectin domain profile. 315 440 IPR001480 -
Trre8g03732 941 MobiDBLite consensus disorder prediction 202 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03732 Trre-Chr8 42462462 42471302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03732 793 919 Receptor kinase-like Gene Family AT3G45860 47.328 6.58e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g03732 B_lectin 2.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03732 - - mtr:11411809 553.132