Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre8g03731 | ATGGCCAGAAGTTCTGATGATGAACCTGTGCTATTAATGGCTTATGAATCTGATGATGATGAACCTGTGAAGTTGACGTTTTCTGATTCTGAAGAAGTTTCAGAAGATGATTATGAAATTGGAGTCAGACTCTATGACTCAGAGTCAGAATCTGAGGTTTCTGAAGATGAGTCAGAGTCAGAAGATGACTCTGAAGATGAAGGAGATTCTGAAGGATCAGACTCTGAAGGATCAGACTCTGAAGGTTCAGACTCTGAAGGTGACTCTGAAGGAGATTCTGAAGGTTCAGAAGATGAAGAAAGTCAAGGTTCTGAAGGAGGAAGAACTTCTGATAACATTTCAGATGCAAGAGCTTCTGAAGGTGAAACTTCTGGGTCTCCAACTTCTGAAGAAGAAGAAGACCTTGAAGGCAAGTCTGATTCTGAATCAGATGGTGGTGATGATTCAGATGGTGCATCTGATTCTGATCCAGAATCTAGTGGTGATTCAGATGGTAGTGATCCAGATTCTGAAGACGTAGGTTCTGGAGGACAAGCTTCTGAATTTGATCATGCCTTTGGAGGAAATCATGACTTTGAAGGTGGACCTTCTGAAGGAGGAGCTTCTAAAGGTAGTCCAGCCTCTAACAATGGTCATGTTTCTAAAGGTGAAACTTCTGAAGGCAGAGTTTCTGGGAGTATTCAAGACTCTGGTGGTCAAGACTCTGAAGGTGGAGCTTCTGGAGTGGGTTGTCCAGCATCTGATACTGTTCCAGAACTGGAAGAAGATTGTGACTCTGGAATAGACTATGGAGTAAGTTCTGGTGTCCAAGGTTCTGAAGAGACAAGTTCTGAGGTCCGAAGTTCTGAATTTGTTACTACAGAAGAAATTCTCGAGAAGCAAGTCTGGTTGCAGGCCATGACAGAAGAACTTGAGACTCTGAGAAACAACTGTGTGTGGAACCAAGAAAAGGAGTTGGGGCAGCAGCTTGGTTATAGAGCTTTGAGTCTATGGCTTGAATGGAGTTTAGTCCAACGTGAATATTCTGGGAAGTCCACCTCTCGCTATGTAGGAATTTGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAACAGAGATAGTCCAATCAACGACACTTCTGGAATCCTATCAATCGACTCAAATGGAAATCTAGTACTCAACAACAACCTTAGCACCATTCCTATTTGGTCTACCAATGTTTCATTACCTCAATATCAAAGAAATAGCACCAGTGTTACAGCTCAACTATCGGATATAGCAAACCTAGTTTTGATGCTAAACAACACCACCAAAACTGTCATATGGGAAAGCTTTGATCATCCAACAGACACCATGCTTCCATATCTAAGGCTTGGTTTTGATAGAAAAACTAATCAAAGTTGGTCCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAAAGATGATGACTATGTAGCACTCTCATATTACACGTATGATAAGTCTATCATATCTAGGATAGTTGTTCAACAATCTGGGTTCTCACAAACATTCACATGGGACAGTCAAAAGAGTCAATGGATCCGGTATTGGTCTGACCCAAATAATCCATGTGATAACTATGGAACATGTGGATCAAACAGCAATTGTGACCCTTCGAACTTTGAGGACTTTAAGTGTACTTGTTTACCTGGTTTTGAACCCAAATTTCCACGTGATTGGTATCAGAGTATAGATGGGTCAGGAGGGTGTGTAAGAAAGAAAGGTGTATCTGATTGTAGGAATGGAGAAGGGTTTGTCAAAGTTGAAAGCTTGAAAGTTCCTGATACATCTGTGGCAGTTGCTAAAGATGGTTTGAGTTTGGAAGAATGTGAGAAAGAATGCTTTAGAAACTGCTCTTGTACTGCCTATGCAGTTGCTGATGTGAGGAATGGTGGAAGTGGATGTTTGACATGGCACGGAAATTTAACAGACATTCAAAAACTTAGTGATCAAGGCCAAGATTTATATTTACGTGTCGATAAAGTTGAACTAGCCAATTACTATAAAAAAGGCAAAGGAGTCCTTGATAAAAAGCGGTTGTCTGCAATTCTTGTAGCTTCTATAGTTGCTATTATCATCATCCTCACCAGTGCAAATTACCTGTGGAAGAAAAAAAGAAAGGATGATATGATGCGGCAATTAAACCAAGAATCCTCTGGAGAAGAGAATGGTGCTCAAAGCAACACAAATCCAAATTTACCGTTTTTCAACTTTAAAACGATAATGACAGCTACAAGAAATTGCGGTCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTATCAAAACATTCGGTTCAAGGAAAAGAAGAGTTTAAAAATGAAGTTAGACTTTTAGTTAAACTACAACACAGAAATCTAGTGAAGTTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTATGAATTCCTACCAAACAAAAGCCTAGACTTCTTTATATTCGGTATGTTCCTCTCACTAACTCATTCATTGTCTCTTGGATATATGTCACCAGAATATGCAATGGAAGGATGTTATTCAACAAAATCTGATGTCTTCAGTTATGGTGTCTTACTACTGGAGATTATTGCTGGCCAAAAAAACACACATTGTGAAAGAAGAGCCTCCCCAAATTTAATTGGACATGTGTGGATACTATGGACAGAAGGAAGAGCCTTGGATACAGTTGATCTGACCCTAAACCAGTCTTATCCTTATGCTATAGTTATGAGATGCATTCAAATTGGACTTTTGTGTGTTCAAGAAAATGCCATGAATAGACCAACAATGACAGAAGTTGTTTTCATGCTATGCAATGAAACACCTCTTTGTCAACCTCAAAAACCAGCATTCTTATTCAATGGCAAACAAGATTTGCAAGAGTCATCAACATCAAGAGGAGGATCTTCAATAAATGAAATAACAGAAACTATTATCAGTGCTCGCTAA | 3000 | 0.3963 | MARSSDDEPVLLMAYESDDDEPVKLTFSDSEEVSEDDYEIGVRLYDSESESEVSEDESESEDDSEDEGDSEGSDSEGSDSEGSDSEGDSEGDSEGSEDEESQGSEGGRTSDNISDARASEGETSGSPTSEEEEDLEGKSDSESDGGDDSDGASDSDPESSGDSDGSDPDSEDVGSGGQASEFDHAFGGNHDFEGGPSEGGASKGSPASNNGHVSKGETSEGRVSGSIQDSGGQDSEGGASGVGCPASDTVPELEEDCDSGIDYGVSSGVQGSEETSSEVRSSEFVTTEEILEKQVWLQAMTEELETLRNNCVWNQEKELGQQLGYRALSLWLEWSLVQREYSGKSTSRYVGIWYNNLPIQTVVWVANRDSPINDTSGILSIDSNGNLVLNNNLSTIPIWSTNVSLPQYQRNSTSVTAQLSDIANLVLMLNNTTKTVIWESFDHPTDTMLPYLRLGFDRKTNQSWSLQSWKTDDDPGKDDDYVALSYYTYDKSIISRIVVQQSGFSQTFTWDSQKSQWIRYWSDPNNPCDNYGTCGSNSNCDPSNFEDFKCTCLPGFEPKFPRDWYQSIDGSGGCVRKKGVSDCRNGEGFVKVESLKVPDTSVAVAKDGLSLEECEKECFRNCSCTAYAVADVRNGGSGCLTWHGNLTDIQKLSDQGQDLYLRVDKVELANYYKKGKGVLDKKRLSAILVASIVAIIIILTSANYLWKKKRKDDMMRQLNQESSGEENGAQSNTNPNLPFFNFKTIMTATRNCGHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKHSVQGKEEFKNEVRLLVKLQHRNLVKLLGCCFEKEERMLVYEFLPNKSLDFFIFGMFLSLTHSLSLGYMSPEYAMEGCYSTKSDVFSYGVLLLEIIAGQKNTHCERRASPNLIGHVWILWTEGRALDTVDLTLNQSYPYAIVMRCIQIGLLCVQENAMNRPTMTEVVFMLCNETPLCQPQKPAFLFNGKQDLQESSTSRGGSSINEITETIISAR | 999 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre8g03731 | 999 | MobiDBLite | consensus disorder prediction | 265 | 283 | - | - | |
Trre8g03731 | 999 | Gene3D | Phosphorylase Kinase; domain 1 | 726 | 827 | - | - | |
Trre8g03731 | 999 | Pfam | Protein tyrosine and serine/threonine kinase | 755 | 837 | IPR001245 | GO:0004672|GO:0006468 | |
Trre8g03731 | 999 | Pfam | Protein tyrosine and serine/threonine kinase | 847 | 952 | IPR001245 | GO:0004672|GO:0006468 | |
Trre8g03731 | 999 | MobiDBLite | consensus disorder prediction | 17 | 49 | - | - | |
Trre8g03731 | 999 | MobiDBLite | consensus disorder prediction | 716 | 735 | - | - | |
Trre8g03731 | 999 | CDD | PAN_AP_plant | 581 | 663 | - | - | |
Trre8g03731 | 999 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 362 | 475 | IPR036426 | - | |
Trre8g03731 | 999 | SMART | ntp_6 | 584 | 663 | IPR003609 | - | |
Trre8g03731 | 999 | ProSiteProfiles | EGF-like domain profile. | 524 | 562 | IPR000742 | - | |
Trre8g03731 | 999 | Pfam | PAN-like domain | 583 | 649 | IPR003609 | - | |
Trre8g03731 | 999 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 345 | 945 | - | - | |
Trre8g03731 | 999 | ProSitePatterns | Protein kinases ATP-binding region signature. | 758 | 780 | IPR017441 | GO:0005524 | |
Trre8g03731 | 999 | MobiDBLite | consensus disorder prediction | 720 | 735 | - | - | |
Trre8g03731 | 999 | SMART | blect_4 | 321 | 444 | IPR001480 | - | |
Trre8g03731 | 999 | ProSiteProfiles | Bulb-type lectin domain profile. | 315 | 440 | IPR001480 | - | |
Trre8g03731 | 999 | MobiDBLite | consensus disorder prediction | 202 | 235 | - | - | |
Trre8g03731 | 999 | Gene3D | Hepatocyte Growth Factor | 581 | 661 | - | - | |
Trre8g03731 | 999 | ProSiteProfiles | Protein kinase domain profile. | 752 | 999 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre8g03731 | 999 | MobiDBLite | consensus disorder prediction | 50 | 100 | - | - | |
Trre8g03731 | 999 | MobiDBLite | consensus disorder prediction | 126 | 169 | - | - | |
Trre8g03731 | 999 | SUPERFAMILY | Protein kinase-like (PK-like) | 734 | 964 | IPR011009 | - | |
Trre8g03731 | 999 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 716 | 827 | - | - | |
Trre8g03731 | 999 | MobiDBLite | consensus disorder prediction | 1 | 283 | - | - | |
Trre8g03731 | 999 | Pfam | D-mannose binding lectin | 361 | 470 | IPR001480 | - | |
Trre8g03731 | 999 | MobiDBLite | consensus disorder prediction | 106 | 125 | - | - | |
Trre8g03731 | 999 | Gene3D | Transferase(Phosphotransferase) domain 1 | 838 | 963 | - | - | |
Trre8g03731 | 999 | ProSiteProfiles | PAN/Apple domain profile. | 583 | 664 | IPR003609 | - | |
Trre8g03731 | 999 | Gene3D | - | 351 | 490 | - | - | |
Trre8g03731 | 999 | Pfam | S-locus glycoprotein domain | 478 | 560 | IPR000858 | GO:0048544 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre8g03731 | Trre-Chr8 | 42462462 | 42471302 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre8g03731 | 673 | 999 | Receptor kinase-like Gene Family | AT4G21410 | 34.406 | 4.88e-49 | 184 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Trre8g03731 | PK_Tyr_Ser-Thr | 2e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre8g03731 | - | - | mtr:11411809 | 640.188 |