Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03731 ATGGCCAGAAGTTCTGATGATGAACCTGTGCTATTAATGGCTTATGAATCTGATGATGATGAACCTGTGAAGTTGACGTTTTCTGATTCTGAAGAAGTTTCAGAAGATGATTATGAAATTGGAGTCAGACTCTATGACTCAGAGTCAGAATCTGAGGTTTCTGAAGATGAGTCAGAGTCAGAAGATGACTCTGAAGATGAAGGAGATTCTGAAGGATCAGACTCTGAAGGATCAGACTCTGAAGGTTCAGACTCTGAAGGTGACTCTGAAGGAGATTCTGAAGGTTCAGAAGATGAAGAAAGTCAAGGTTCTGAAGGAGGAAGAACTTCTGATAACATTTCAGATGCAAGAGCTTCTGAAGGTGAAACTTCTGGGTCTCCAACTTCTGAAGAAGAAGAAGACCTTGAAGGCAAGTCTGATTCTGAATCAGATGGTGGTGATGATTCAGATGGTGCATCTGATTCTGATCCAGAATCTAGTGGTGATTCAGATGGTAGTGATCCAGATTCTGAAGACGTAGGTTCTGGAGGACAAGCTTCTGAATTTGATCATGCCTTTGGAGGAAATCATGACTTTGAAGGTGGACCTTCTGAAGGAGGAGCTTCTAAAGGTAGTCCAGCCTCTAACAATGGTCATGTTTCTAAAGGTGAAACTTCTGAAGGCAGAGTTTCTGGGAGTATTCAAGACTCTGGTGGTCAAGACTCTGAAGGTGGAGCTTCTGGAGTGGGTTGTCCAGCATCTGATACTGTTCCAGAACTGGAAGAAGATTGTGACTCTGGAATAGACTATGGAGTAAGTTCTGGTGTCCAAGGTTCTGAAGAGACAAGTTCTGAGGTCCGAAGTTCTGAATTTGTTACTACAGAAGAAATTCTCGAGAAGCAAGTCTGGTTGCAGGCCATGACAGAAGAACTTGAGACTCTGAGAAACAACTGTGTGTGGAACCAAGAAAAGGAGTTGGGGCAGCAGCTTGGTTATAGAGCTTTGAGTCTATGGCTTGAATGGAGTTTAGTCCAACGTGAATATTCTGGGAAGTCCACCTCTCGCTATGTAGGAATTTGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAACAGAGATAGTCCAATCAACGACACTTCTGGAATCCTATCAATCGACTCAAATGGAAATCTAGTACTCAACAACAACCTTAGCACCATTCCTATTTGGTCTACCAATGTTTCATTACCTCAATATCAAAGAAATAGCACCAGTGTTACAGCTCAACTATCGGATATAGCAAACCTAGTTTTGATGCTAAACAACACCACCAAAACTGTCATATGGGAAAGCTTTGATCATCCAACAGACACCATGCTTCCATATCTAAGGCTTGGTTTTGATAGAAAAACTAATCAAAGTTGGTCCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAAAGATGATGACTATGTAGCACTCTCATATTACACGTATGATAAGTCTATCATATCTAGGATAGTTGTTCAACAATCTGGGTTCTCACAAACATTCACATGGGACAGTCAAAAGAGTCAATGGATCCGGTATTGGTCTGACCCAAATAATCCATGTGATAACTATGGAACATGTGGATCAAACAGCAATTGTGACCCTTCGAACTTTGAGGACTTTAAGTGTACTTGTTTACCTGGTTTTGAACCCAAATTTCCACGTGATTGGTATCAGAGTATAGATGGGTCAGGAGGGTGTGTAAGAAAGAAAGGTGTATCTGATTGTAGGAATGGAGAAGGGTTTGTCAAAGTTGAAAGCTTGAAAGTTCCTGATACATCTGTGGCAGTTGCTAAAGATGGTTTGAGTTTGGAAGAATGTGAGAAAGAATGCTTTAGAAACTGCTCTTGTACTGCCTATGCAGTTGCTGATGTGAGGAATGGTGGAAGTGGATGTTTGACATGGCACGGAAATTTAACAGACATTCAAAAACTTAGTGATCAAGGCCAAGATTTATATTTACGTGTCGATAAAGTTGAACTAGCCAATTACTATAAAAAAGGCAAAGGAGTCCTTGATAAAAAGCGGTTGTCTGCAATTCTTGTAGCTTCTATAGTTGCTATTATCATCATCCTCACCAGTGCAAATTACCTGTGGAAGAAAAAAAGAAAGGATGATATGATGCGGCAATTAAACCAAGAATCCTCTGGAGAAGAGAATGGTGCTCAAAGCAACACAAATCCAAATTTACCGTTTTTCAACTTTAAAACGATAATGACAGCTACAAGAAATTGCGGTCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTATCAAAACATTCGGTTCAAGGAAAAGAAGAGTTTAAAAATGAAGTTAGACTTTTAGTTAAACTACAACACAGAAATCTAGTGAAGTTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTATGAATTCCTACCAAACAAAAGCCTAGACTTCTTTATATTCGGTATGTTCCTCTCACTAACTCATTCATTGTCTCTTGGATATATGTCACCAGAATATGCAATGGAAGGATGTTATTCAACAAAATCTGATGTCTTCAGTTATGGTGTCTTACTACTGGAGATTATTGCTGGCCAAAAAAACACACATTGTGAAAGAAGAGCCTCCCCAAATTTAATTGGACATGTGTGGATACTATGGACAGAAGGAAGAGCCTTGGATACAGTTGATCTGACCCTAAACCAGTCTTATCCTTATGCTATAGTTATGAGATGCATTCAAATTGGACTTTTGTGTGTTCAAGAAAATGCCATGAATAGACCAACAATGACAGAAGTTGTTTTCATGCTATGCAATGAAACACCTCTTTGTCAACCTCAAAAACCAGCATTCTTATTCAATGGCAAACAAGATTTGCAAGAGTCATCAACATCAAGAGGAGGATCTTCAATAAATGAAATAACAGAAACTATTATCAGTGCTCGCTAA 3000 0.3963 MARSSDDEPVLLMAYESDDDEPVKLTFSDSEEVSEDDYEIGVRLYDSESESEVSEDESESEDDSEDEGDSEGSDSEGSDSEGSDSEGDSEGDSEGSEDEESQGSEGGRTSDNISDARASEGETSGSPTSEEEEDLEGKSDSESDGGDDSDGASDSDPESSGDSDGSDPDSEDVGSGGQASEFDHAFGGNHDFEGGPSEGGASKGSPASNNGHVSKGETSEGRVSGSIQDSGGQDSEGGASGVGCPASDTVPELEEDCDSGIDYGVSSGVQGSEETSSEVRSSEFVTTEEILEKQVWLQAMTEELETLRNNCVWNQEKELGQQLGYRALSLWLEWSLVQREYSGKSTSRYVGIWYNNLPIQTVVWVANRDSPINDTSGILSIDSNGNLVLNNNLSTIPIWSTNVSLPQYQRNSTSVTAQLSDIANLVLMLNNTTKTVIWESFDHPTDTMLPYLRLGFDRKTNQSWSLQSWKTDDDPGKDDDYVALSYYTYDKSIISRIVVQQSGFSQTFTWDSQKSQWIRYWSDPNNPCDNYGTCGSNSNCDPSNFEDFKCTCLPGFEPKFPRDWYQSIDGSGGCVRKKGVSDCRNGEGFVKVESLKVPDTSVAVAKDGLSLEECEKECFRNCSCTAYAVADVRNGGSGCLTWHGNLTDIQKLSDQGQDLYLRVDKVELANYYKKGKGVLDKKRLSAILVASIVAIIIILTSANYLWKKKRKDDMMRQLNQESSGEENGAQSNTNPNLPFFNFKTIMTATRNCGHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKHSVQGKEEFKNEVRLLVKLQHRNLVKLLGCCFEKEERMLVYEFLPNKSLDFFIFGMFLSLTHSLSLGYMSPEYAMEGCYSTKSDVFSYGVLLLEIIAGQKNTHCERRASPNLIGHVWILWTEGRALDTVDLTLNQSYPYAIVMRCIQIGLLCVQENAMNRPTMTEVVFMLCNETPLCQPQKPAFLFNGKQDLQESSTSRGGSSINEITETIISAR 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03731 999 MobiDBLite consensus disorder prediction 265 283 - -
Trre8g03731 999 Gene3D Phosphorylase Kinase; domain 1 726 827 - -
Trre8g03731 999 Pfam Protein tyrosine and serine/threonine kinase 755 837 IPR001245 GO:0004672|GO:0006468
Trre8g03731 999 Pfam Protein tyrosine and serine/threonine kinase 847 952 IPR001245 GO:0004672|GO:0006468
Trre8g03731 999 MobiDBLite consensus disorder prediction 17 49 - -
Trre8g03731 999 MobiDBLite consensus disorder prediction 716 735 - -
Trre8g03731 999 CDD PAN_AP_plant 581 663 - -
Trre8g03731 999 SUPERFAMILY alpha-D-mannose-specific plant lectins 362 475 IPR036426 -
Trre8g03731 999 SMART ntp_6 584 663 IPR003609 -
Trre8g03731 999 ProSiteProfiles EGF-like domain profile. 524 562 IPR000742 -
Trre8g03731 999 Pfam PAN-like domain 583 649 IPR003609 -
Trre8g03731 999 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 345 945 - -
Trre8g03731 999 ProSitePatterns Protein kinases ATP-binding region signature. 758 780 IPR017441 GO:0005524
Trre8g03731 999 MobiDBLite consensus disorder prediction 720 735 - -
Trre8g03731 999 SMART blect_4 321 444 IPR001480 -
Trre8g03731 999 ProSiteProfiles Bulb-type lectin domain profile. 315 440 IPR001480 -
Trre8g03731 999 MobiDBLite consensus disorder prediction 202 235 - -
Trre8g03731 999 Gene3D Hepatocyte Growth Factor 581 661 - -
Trre8g03731 999 ProSiteProfiles Protein kinase domain profile. 752 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03731 999 MobiDBLite consensus disorder prediction 50 100 - -
Trre8g03731 999 MobiDBLite consensus disorder prediction 126 169 - -
Trre8g03731 999 SUPERFAMILY Protein kinase-like (PK-like) 734 964 IPR011009 -
Trre8g03731 999 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 716 827 - -
Trre8g03731 999 MobiDBLite consensus disorder prediction 1 283 - -
Trre8g03731 999 Pfam D-mannose binding lectin 361 470 IPR001480 -
Trre8g03731 999 MobiDBLite consensus disorder prediction 106 125 - -
Trre8g03731 999 Gene3D Transferase(Phosphotransferase) domain 1 838 963 - -
Trre8g03731 999 ProSiteProfiles PAN/Apple domain profile. 583 664 IPR003609 -
Trre8g03731 999 Gene3D - 351 490 - -
Trre8g03731 999 Pfam S-locus glycoprotein domain 478 560 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03731 Trre-Chr8 42462462 42471302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03731 673 999 Receptor kinase-like Gene Family AT4G21410 34.406 4.88e-49 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g03731 PK_Tyr_Ser-Thr 2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03731 - - mtr:11411809 640.188