Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03730 ATGGACTCTTCTAAAAATCTTAACTATCCTGTCACAACCCAAAATCCTAAACACAAGTTGTTAGTGTTACATAACTTTTTGATTCTAATACATATCACCTTCTATTTTTGCTCTTGTTCTTCTGATACCATATCTATTAACAAACCAATAAGAGATGGTGAGCTTCTGATTTCTAAATCAAAAACGTTTGCTCTTGGATTCTTCACACCAGGAAAATCCACCTCTCGCTATGTTGGAATTTGGTACAACAATTTGCCAATCCAAACCGTTGTTTGGGTTGCAAACAGAGATAGTCCAATCAATGACTCTTCTGGAATTCTAGCAATCAGTCCAAATGGAAATCTAGTACTCCACTGCAACCTTAGTAGCACCATTCCCATTTGGTCTACCAATGTTTCATTACCACAATCACAACTAAATAGCACCAGTGTTGTTATAGCTAAACTATCGGATATAGCAAACCTTGTTCTGATGATAAACAACACCAGAACTGTATTATGGGAAAGCTTTGATCATCCAACAGACACTTTGCTTCCATATCAAAGGCTTGGTTTTGATAGAAAAAATAATCAAAGTTGGTTCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAATGGGGCATTCACAGCAAAATTCAGCACCATTGGCAAACCTCAGTTGTTTATGTATAACCATGATCTTCCTTGGTGGCGTGCTGGACATTGGAATGGTGCACTATTAGTAGGTCTACCTAATATGAAACGAGATATGGCCATTTCTAATGTTTCTTTGGTTGAAGATGACAACTACGTAGCACTCTCATATAACATGTTTGATAAGTCTGTCATTACTAGGATAGTAGTTCAGCAATCTGGTTTCACACAAACATTCTCGTGGGACAGTCAAAAGAGTCAATGGATCCGGCACTGGTCTGAACCAACAGACCAATGTGATAGCTATGGAACATGTGGATCAAACAGTAATTGTGACTCTTCAAACTTTGACGACTTTAAGTGTACTTGTTTACTTGGTTTTGAACCCAAGTTTCCACGTGATTGGTATGAGAGTAGAGATGGGTCAGGAGGGTGTGTAAGGAAGAAAGGTGAATCTGTTTGTCAGAATGGAGAAGGGTTTGTCAGAGTTGAAAGCTTGAAAGTTCCTGATACATCTGTTGCAGTTTCCAAAGGTGGTTTGAGTTTGGAAGAATGTGATAAAGAATGCTTGAGAGACTGCTCTTGTACTGCCTATGCAGTTGCTGATGTGAGGAATGGTGGAAATGGATGTTTGACATGGCACGGAAATTTAACAGACATTCAAAAACTTACTGATCAAGGCCAAGATTTATTTTTACGCGTCGATAAAGTTGAACTCGCCAATTACTACAAAAGAAGCAAAGGATTCCTTGATAAAAAGAGGCTGGCTGCAATTCTGGTAGCTTCTATAGTTTCAATTGTCCTCCTCCTTCTCTTCTGTGTGCATTGCATATGGAGGAGAAAAAGAAAGGATAAAATGATGCGGCAATTAAACCAAGATTCCTCTGGAGAAGAGAATGATGCTCAAAGCAATGCACATCCAAATCTACCCCTTTTCAGCTTTAAAACGATAATGACAGCTACAAGAAATTGTGGTCATGAGAATAAGCTTGGACAAGGTGGTTTTGGCTCTGTCTACAAGGGTTGCTTGGTTAATGGACAAGTGATAGCAGTGAAAAGATTCTTTGAAAACGAAGAAAGGATGCTAGTTTACGAATACCTACCAAATAAAAGCCTAGACTTCTTTATATTCGATCAAAACCAAAGGTCTTCATTGGATTGGGATTTTGGTATGGCAAGAATATTCGGAGAAGATGAAATCCAAGCAAGAACAAAAAGAGTGGTTGGGACATATGGATATATGGCACCAGAATATGCCATGGAAGGACGATATTCAACGAAAACTGATGTCTTCAGTTATGGGGTCTTACTATTGGAGATTATTGGTGGCAAAAGAAATACACATTGTGAAATAGGAAGAGACTCCCTAAATTTAATTGGGCATGTGTGGACACTATGGACAGAAGGAAGGGCCTTGGAAACTGTTGATCCAGCACTAAACCAGTCTTATCCTCCTGCTACTGTTTTGAGATGCATTCAAATTGGACTCTTGTGTGTGCAAGAAAATGCCATGAATAGACCAACAATGTCAGAAGTTGTTTTCATGCTATGCAATGAAACACCTCTTTGCCAACCTCAAAAACCAGCATTCTTATTCATTGGAAACCAAGTTTTGCAAGACTCATCAACATCAGGAGGAGGATCATCAATAAATGAAGTAACGGAAACTACCATCAGTGGCCGCTAA 2322 0.3906 MDSSKNLNYPVTTQNPKHKLLVLHNFLILIHITFYFCSCSSDTISINKPIRDGELLISKSKTFALGFFTPGKSTSRYVGIWYNNLPIQTVVWVANRDSPINDSSGILAISPNGNLVLHCNLSSTIPIWSTNVSLPQSQLNSTSVVIAKLSDIANLVLMINNTRTVLWESFDHPTDTLLPYQRLGFDRKNNQSWFLQSWKTDDDPGNGAFTAKFSTIGKPQLFMYNHDLPWWRAGHWNGALLVGLPNMKRDMAISNVSLVEDDNYVALSYNMFDKSVITRIVVQQSGFTQTFSWDSQKSQWIRHWSEPTDQCDSYGTCGSNSNCDSSNFDDFKCTCLLGFEPKFPRDWYESRDGSGGCVRKKGESVCQNGEGFVRVESLKVPDTSVAVSKGGLSLEECDKECLRDCSCTAYAVADVRNGGNGCLTWHGNLTDIQKLTDQGQDLFLRVDKVELANYYKRSKGFLDKKRLAAILVASIVSIVLLLLFCVHCIWRRKRKDKMMRQLNQDSSGEENDAQSNAHPNLPLFSFKTIMTATRNCGHENKLGQGGFGSVYKGCLVNGQVIAVKRFFENEERMLVYEYLPNKSLDFFIFDQNQRSSLDWDFGMARIFGEDEIQARTKRVVGTYGYMAPEYAMEGRYSTKTDVFSYGVLLLEIIGGKRNTHCEIGRDSLNLIGHVWTLWTEGRALETVDPALNQSYPPATVLRCIQIGLLCVQENAMNRPTMSEVVFMLCNETPLCQPQKPAFLFIGNQVLQDSSTSGGGSSINEVTETTISGR 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03730 773 Gene3D Hepatocyte Growth Factor 363 444 - -
Trre8g03730 773 SMART blect_4 47 173 IPR001480 -
Trre8g03730 773 SMART ntp_6 367 446 IPR003609 -
Trre8g03730 773 Pfam S-locus glycoprotein domain 231 343 IPR000858 GO:0048544
Trre8g03730 773 CDD B_lectin 47 173 IPR001480 -
Trre8g03730 773 ProSiteProfiles EGF-like domain profile. 307 345 IPR000742 -
Trre8g03730 773 CDD PAN_AP_plant 367 446 - -
Trre8g03730 773 Gene3D Phosphorylase Kinase; domain 1 506 572 - -
Trre8g03730 773 Pfam Protein tyrosine and serine/threonine kinase 600 726 IPR001245 GO:0004672|GO:0006468
Trre8g03730 773 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 204 IPR036426 -
Trre8g03730 773 ProSitePatterns Protein kinases ATP-binding region signature. 542 564 IPR017441 GO:0005524
Trre8g03730 773 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 36 170 - -
Trre8g03730 773 MobiDBLite consensus disorder prediction 752 773 - -
Trre8g03730 773 PIRSF SRK 14 569 IPR024171 GO:0004674
Trre8g03730 773 PIRSF SRK 566 599 IPR024171 GO:0004674
Trre8g03730 773 PIRSF SRK 600 773 IPR024171 GO:0004674
Trre8g03730 773 Pfam PAN-like domain 366 432 IPR003609 -
Trre8g03730 773 SUPERFAMILY Protein kinase-like (PK-like) 518 738 IPR011009 -
Trre8g03730 773 Gene3D - 35 171 IPR036426 -
Trre8g03730 773 ProSiteProfiles PAN/Apple domain profile. 366 447 IPR003609 -
Trre8g03730 773 Pfam D-mannose binding lectin 89 199 IPR001480 -
Trre8g03730 773 ProSiteProfiles Bulb-type lectin domain profile. 41 170 IPR001480 -
Trre8g03730 773 Gene3D Transferase(Phosphotransferase) domain 1 592 736 - -
Trre8g03730 773 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 27 719 - -
Trre8g03730 773 ProSiteProfiles Protein kinase domain profile. 409 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03730 Trre-Chr8 42456318 42460911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03730 479 744 Receptor kinase-like Gene Family AT3G45860 39.368 8.87e-64 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g03730 PK_Tyr_Ser-Thr 8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03730 - - tpra:123918163 1387.47