Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03729 ATGGACTCTTCTAAAAATCTTAACTATCCTGTCACAACCCAAAATCCTAAACACAAGTTGTTAGTGTTACATAACTTTTTGATTCTAATACATATCACCTTCTATTTTTGCTCTTGTTCTTCTGATACCATATCTATTAACAAACCAATAAGAGATGGTGAGCTTCTGATTTCTAAATCAAAAACGTTTGCTCTTGGATTCTTCACACCAGGAAAATCCACCTCTCGCTATGTTGGAATTTGGTACAACAATTTGCCAATCCAAACCGTTGTTTGGGTTGCAAACAGAGATAGTCCAATCAATGACTCTTCTGGAATTCTAGCAATCAGTCCAAATGGAAATCTAGTACTCCACTGCAACCTTAGTAGCACCATTCCCATTTGGTCTACCAATGTTTCATTACCACAATCACAACTAAATAGCACCAGTGTTGTTATAGCTAAACTATCGGATATAGCAAACCTTGTTCTGATGATAAACAACACCAGAACTGTATTATGGGAAAGCTTTGATCATCCAACAGACACTTTGCTTCCATATCAAAGGCTTGGTTTTGATAGAAAAAATAATCAAAGTTGGTTCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAATGGGGCATTCACAGCAAAATTCAGCACCATTGGCAAACCTCAGTTGTTTATGTATAACCATGATCTTCCTTGGTGGCGTGCTGGACATTGGAATGGTGCACTATTAGTAGGTCTACCTAATATGAAACGAGATATGGCCATTTCTAATGTTTCTTTGGTTGAAGATGACAACTACGTAGCACTCTCATATAACATGTTTGATAAGTCTGTCATTACTAGGATAGTAGTTCAGCAATCTGGTTTCACACAAACATTCTCGTGGGACAGTCAAAAGAGTCAATGGATCCGGCACTGGTCTGAACCAACAGACCAATGTGATAGCTATGGAACATGTGGATCAAACAGTAATTGTGACTCTTCAAACTTTGACGACTTTAAGTGTACTTGTTTACTTGGTTTTGAACCCAAGTTTCCACGTGATTGGTATGAGAGTAGAGATGGGTCAGGAGGGTGTGTAAGGAAGAAAGGTGAATCTGTTTGTCAGAATGGAGAAGGGTTTGTCAGAGTTGAAAGCTTGAAAGTTCCTGATACATCTGTTGCAGTTTCCAAAGGTGGTTTGAGTTTGGAAGAATGTGATAAAGAATGCTTGAGAGACTGCTCTTGTACTGCCTATGCAGTTGCTGATGTGAGGAATGGTGGAAATGGATGTTTGACATGGCACGGAAATTTAACAGACATTCAAAAACTTACTGATCAAGGCCAAGATTTATTTTTACGCGTCGATAAAGTTGAACTCGCAGCCAATTACTACAAAAGAAGCAAAGGATTCCTTGATAAAAAGAGGCTGGCTGCAATTCTGGTAGCTTCTATAGTTTCAATTGTCCTCCTCCTTCTCTTCTGTGTGCATTGCATATGGAGGAGAAAAAGAAAGGATAAAATGATGCGGCAATTAAACCAAGATTCCTCTGGAGAAGAGAATGATGCTCAAAGCAATGCACATCCAAATCTACCCCTTTTCAGCTTTAAAACGATAATGACAGCTACAAGAAATTGTGGTCATGAGAATAAGCTTGGACAAGGTGGTTTTGGCTCTGTCTACAAGGGTTGCTTGGTTAATGGACAAGTGATAGCAGTGAAAAGATTCTTTGAAAACGAAGAAAGGATGCTAGTTTACGAATACCTACCAAATAAAAGCCTAGACTTCTTTATATTCGATCAAAACCAAAGGTCTTCATTGGATTGGGATTTTGGTATGGCAAGAATATTCGGAGAAGATGAAATCCAAGCAAGAACAAAAAGAGTGGTTGGGACATATGGATATATGGCACCAGAATATGCCATGGAAGGACGATATTCAACGAAAACTGATGTCTTCAGTTATGGGGTCTTACTATTGGAGATTATTGGTGGCAAAAGAAATACACATTGTGAAATAGGAAGAGACTCCCTAAATTTAATTGGGCATGTGTGGACACTATGGACAGAAGGAAGGGCCTTGGAAACTGTTGATCCAGCACTAAACCAGTCTTATCCTCCTGCTACTGTTTTGAGATGCATTCAAATTGGACTCTTGTGTGTGCAAGAAAATGCCATGAATAGACCAACAATGTCAGAAGTTGTTTTCATGCTATGCAATGAAACACCTCTTTGCCAACCTCAAAAACCAGCATTCTTATTCATTGGAAACCAAGTTTTGCAAGACTCATCAACATCAGGAGGAGGATCATCAATAAATGAAGTAACGGAAACTACCATCAGTGGCCGCTAA 2325 0.391 MDSSKNLNYPVTTQNPKHKLLVLHNFLILIHITFYFCSCSSDTISINKPIRDGELLISKSKTFALGFFTPGKSTSRYVGIWYNNLPIQTVVWVANRDSPINDSSGILAISPNGNLVLHCNLSSTIPIWSTNVSLPQSQLNSTSVVIAKLSDIANLVLMINNTRTVLWESFDHPTDTLLPYQRLGFDRKNNQSWFLQSWKTDDDPGNGAFTAKFSTIGKPQLFMYNHDLPWWRAGHWNGALLVGLPNMKRDMAISNVSLVEDDNYVALSYNMFDKSVITRIVVQQSGFTQTFSWDSQKSQWIRHWSEPTDQCDSYGTCGSNSNCDSSNFDDFKCTCLLGFEPKFPRDWYESRDGSGGCVRKKGESVCQNGEGFVRVESLKVPDTSVAVSKGGLSLEECDKECLRDCSCTAYAVADVRNGGNGCLTWHGNLTDIQKLTDQGQDLFLRVDKVELAANYYKRSKGFLDKKRLAAILVASIVSIVLLLLFCVHCIWRRKRKDKMMRQLNQDSSGEENDAQSNAHPNLPLFSFKTIMTATRNCGHENKLGQGGFGSVYKGCLVNGQVIAVKRFFENEERMLVYEYLPNKSLDFFIFDQNQRSSLDWDFGMARIFGEDEIQARTKRVVGTYGYMAPEYAMEGRYSTKTDVFSYGVLLLEIIGGKRNTHCEIGRDSLNLIGHVWTLWTEGRALETVDPALNQSYPPATVLRCIQIGLLCVQENAMNRPTMSEVVFMLCNETPLCQPQKPAFLFIGNQVLQDSSTSGGGSSINEVTETTISGR 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03729 774 Gene3D Hepatocyte Growth Factor 363 444 - -
Trre8g03729 774 SMART blect_4 47 173 IPR001480 -
Trre8g03729 774 SMART ntp_6 367 446 IPR003609 -
Trre8g03729 774 ProSitePatterns Protein kinases ATP-binding region signature. 543 565 IPR017441 GO:0005524
Trre8g03729 774 MobiDBLite consensus disorder prediction 753 774 - -
Trre8g03729 774 Pfam S-locus glycoprotein domain 231 343 IPR000858 GO:0048544
Trre8g03729 774 CDD B_lectin 47 173 IPR001480 -
Trre8g03729 774 Gene3D Phosphorylase Kinase; domain 1 507 573 - -
Trre8g03729 774 ProSiteProfiles EGF-like domain profile. 307 345 IPR000742 -
Trre8g03729 774 CDD PAN_AP_plant 367 446 - -
Trre8g03729 774 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 204 IPR036426 -
Trre8g03729 774 SUPERFAMILY Protein kinase-like (PK-like) 519 739 IPR011009 -
Trre8g03729 774 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 36 170 - -
Trre8g03729 774 Pfam PAN-like domain 366 432 IPR003609 -
Trre8g03729 774 Gene3D Transferase(Phosphotransferase) domain 1 593 737 - -
Trre8g03729 774 Pfam Protein tyrosine and serine/threonine kinase 601 727 IPR001245 GO:0004672|GO:0006468
Trre8g03729 774 ProSiteProfiles Protein kinase domain profile. 409 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03729 774 PIRSF SRK 14 570 IPR024171 GO:0004674
Trre8g03729 774 PIRSF SRK 601 774 IPR024171 GO:0004674
Trre8g03729 774 PIRSF SRK 567 600 IPR024171 GO:0004674
Trre8g03729 774 Pfam D-mannose binding lectin 89 199 IPR001480 -
Trre8g03729 774 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 27 720 - -
Trre8g03729 774 Gene3D - 35 171 IPR036426 -
Trre8g03729 774 ProSiteProfiles PAN/Apple domain profile. 366 447 IPR003609 -
Trre8g03729 774 ProSiteProfiles Bulb-type lectin domain profile. 41 170 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03729 Trre-Chr8 42456318 42460911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03729 480 745 Receptor kinase-like Gene Family AT3G45860 39.368 8.74e-64 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g03729 PK_Tyr_Ser-Thr 8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03729 - - tpra:123918163 1382.85