Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03728 ATGCTAGTTTATGAATACCTCCCAAACAAAAGCCTAGACTTCTTTATATTCGATCAAAACCAAGGGTCATCATTGAATTGGGGTATACGTTTCAAAATTATTTGTGGGATTGCTCGAGGTGTATTATATCTTCATCAAGATTCAAGGTTGAAAATAATTCATAGAGATCTAAAGGCCAGCAACGTTCTCCTTGATGCTGCAATGAATCCCAAAATATCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAAGAACAAAAAGAGTGGTTGGAACATATGGATATATGTCACCAGAATATGCGATGGAAGGACGATATTCAACAAAATCTGATGTCTTCAGAAGAGCCTCCCCAAATTTAATTGGGCATGTGTGGACACTATGGACAGAAGGAAGGACCTTGGAAACAGTTGATTCAACACTAAATCAGTCTTATCCTCCTGCTATAGTTATGAGATGCATTCAAATTGGACTCTTGTGTGTTCAAGAAAATTCCACCTGCTATAATATGAATGGTCTAGATTATACATTATTTCTTCAATTGTTTTAG 561 0.3619 MLVYEYLPNKSLDFFIFDQNQGSSLNWGIRFKIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDEIQARTKRVVGTYGYMSPEYAMEGRYSTKSDVFRRASPNLIGHVWTLWTEGRTLETVDSTLNQSYPPAIVMRCIQIGLLCVQENSTCYNMNGLDYTLFLQLF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03728 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03728 186 Pfam Protein kinase domain 2 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03728 186 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 7 98 - -
Trre8g03728 186 SUPERFAMILY Protein kinase-like (PK-like) 1 169 IPR011009 -
Trre8g03728 186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Trre8g03728 186 SMART serkin_6 2 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03728 186 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 170 - -
Trre8g03728 186 Gene3D Transferase(Phosphotransferase) domain 1 7 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03728 Trre-Chr8 42450163 42451718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03728 1 168 Receptor kinase-like Gene Family AT4G11530 56.085 1.58e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g03728 Pkinase 3.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03728 - - tpra:123918163 308.145