Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03723 ATGGACTCTGCTAAAAATCTTCTGTACCTTGTCACAACTCAAAATCATAAACTAAAATTGTTACTATTACATAACAGTTGCTTGCTTAACTCTTTGATTCTACTTCTTCTCACATTCTCTTTTTGCTCTTGTTCTTCTGATACCATATCTTCTGATAAACCCATAAGAGATGGTGAGGTTCTTGTTTCCAAATCTAAAACGTTTGCGCTTGGATTCTTCACTCCAGCAAAGTCCACCTCTCGCTATGTCGGAATTTGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAATAGAGATAATCCAATAAATGACACTTCTGGGATTCTATCAATCAACCCGAATGGAAATCTAGTAATTCACCACAACCTCAACACCATTCCCATTTGGTCTACCAATGTTTCATTCCCACAATCACAAAGAAATAGCACCAGTGTTGTTATAGCTCAACTATCCGATATAGAAAACCTTGTTCTAGTGCTAAACAACACCAAAACTGTCATATGGGAAAACTTTGATCATCCCACAGACACTTTGCTTCCATATCTAAAGCTTGGTTATGATAGAAAAGTTAGCAAAAGTTGGATCCTCCAGTCATGGAAGACAGATGATGACCCTGGAAAAGGCGCCTTCACGACGAAATTCATCAGCACCAATCGTATACCTCAGTTGTTTATGTACAACGGAAACCATCCTTGGTGGCGTGGAGGACATTGGAACGGAGCATTATTAGTAGGCGCACCTAATATGAAACGAGATATGGCGATTTTGAATGTTTCTTTTGTGGAAGATGATGATAACTATGTAGCAATATTATATAACATGTTTGATAAGTCTGTCATAGCTAGGATAGTTGTACAACAATCTGGTTTCTTTCAAATATTCACTTGGAACAATCAAAAGAGTCAATGGAACAGGTTCTGGTCAGAACCAATAAACCAATGTGATAACTATGGAACATGTGGATCAAACAGTAATTGTGACCCTTTGAACTTTGAGGACTTTAAGTGTACCTGTTTACCTGGTTTTGAACCAAAATTTCCACGTGACTGGTATGAGAGTAGTGATGGGTCAGGAGGGTGTGTAAGGAAGAAAGGTGTTTCTGTTTGTGGGAATGGTGAAGGGTTTGTCAAAGTTGAAAGCTTGAAAGTTCCTGATACATCTGTTGCAGTTTTCAAAGGTGGTTTGAGTTTGGAAGAATGTCAGAAAGAATGCTTGACAAACTGCTCTTGGACTGCCTATGCAGCTGCTGATGTGAGGAATGGTGGAAGTGGTTGTTTGGCATGGTATGGGGATTTAATGGACATTCAAAAACTAAGTGATCAAGGCCAAGATTTATTTTTACGCGTTGATAAAGTTGAACTCGCCGAAGTTAATGACAACAAAAAAAGCGAAGGAGTCCTTGGTAAAAAGAGGTTGCCTGCAATTTTGGTAGCTTCAATAGTTGCAATTGTCCTCCTCCTCTCCTGTGTGTATTACATATGTAAGCAAAAAAGAAAAGATAAAATGATGCAGCAATTAAACCAAGATTCCTCTGGAGAAGAGAATGGTGCTCAAAGAAACACACATCCAAATCTACCCTTTTTCAGCTTTAAAACGATATCAGCAGCTACAAGAAATTTTAGTCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCAAGAAATTCAGGTCAAGGCAAACAAGAGTTTAAAAATGAAGTTAGACTTTTAGTTAAACTTCAACACAGAAATCTAGTGAGATTGCTTGGTTGTTGCTTTGAAAAAGAAGAAAGAATGCTAATTTATGAATACCTCCCAAACAAAAGCCTAGACTTCTTTATATTCGATAAAAACCAAAAGTCGTCATTGTTGGATAGGGGCAAGCGTTTTGAAATTATTTGCGGGATTGCTCGAGGTGTTTTATATCTACATCAAGATTCAAGGCTTAAAATAATTCATAGAGATCTAAAAGCCAGCTATGTTCTCCTTGATGCTACAATGAATCCCAAAATCTCAGATTTCGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAACAAGAACAAAAAGAGTGGTCGGAACATATGGATATATGTCACCAGAATATGCAATGGAAGGACGATATTCAACAAAATCCGATGTCTTTAGTTACGGTGTCTTGCTACTGGAGATTATTGCTGGCCAAAGAAACACACATTGTGAAATAGGAAGAGCATTTTCAAATTTACTTGGACATCAACTTTTATTGGCTAAAACCTACCAATTTACCTTGAAAACACCCTTGAAATGCAATCATGATGAGGAATCATCAGTGTGGACACTATGGACAGAAGGAAGGGCCTTGGATACAGTTGATTCAACACTAAATCAGTCATATCCTCCTGCTATAGTTATGAGATGCATTCAAATTGGACTGTTGTGTGTGCAAGAAAATGCCATGAATAGACCAACAATGACAGAAGTTGTGTTCATGCTATGCAATGAAACACCTCTTTCCCAACCTAAAAAACCAGCATTCTTATTCAATGGCAACCATGATTTGCAAGAGTCGTCAACATCAGGAGGAGGATCTTCAATAAATGAGTTAACAGAAACTACCATTAGTGCTCGCTAA 2658 0.3792 MDSAKNLLYLVTTQNHKLKLLLLHNSCLLNSLILLLLTFSFCSCSSDTISSDKPIRDGEVLVSKSKTFALGFFTPAKSTSRYVGIWYNNLPIQTVVWVANRDNPINDTSGILSINPNGNLVIHHNLNTIPIWSTNVSFPQSQRNSTSVVIAQLSDIENLVLVLNNTKTVIWENFDHPTDTLLPYLKLGYDRKVSKSWILQSWKTDDDPGKGAFTTKFISTNRIPQLFMYNGNHPWWRGGHWNGALLVGAPNMKRDMAILNVSFVEDDDNYVAILYNMFDKSVIARIVVQQSGFFQIFTWNNQKSQWNRFWSEPINQCDNYGTCGSNSNCDPLNFEDFKCTCLPGFEPKFPRDWYESSDGSGGCVRKKGVSVCGNGEGFVKVESLKVPDTSVAVFKGGLSLEECQKECLTNCSWTAYAAADVRNGGSGCLAWYGDLMDIQKLSDQGQDLFLRVDKVELAEVNDNKKSEGVLGKKRLPAILVASIVAIVLLLSCVYYICKQKRKDKMMQQLNQDSSGEENGAQRNTHPNLPFFSFKTISAATRNFSHENKLGQGGFGSVYKGCLVNGQEIAVKRLSRNSGQGKQEFKNEVRLLVKLQHRNLVRLLGCCFEKEERMLIYEYLPNKSLDFFIFDKNQKSSLLDRGKRFEIICGIARGVLYLHQDSRLKIIHRDLKASYVLLDATMNPKISDFGMARIFGEDEIQTRTKRVVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIIAGQRNTHCEIGRAFSNLLGHQLLLAKTYQFTLKTPLKCNHDEESSVWTLWTEGRALDTVDSTLNQSYPPAIVMRCIQIGLLCVQENAMNRPTMTEVVFMLCNETPLSQPKKPAFLFNGNHDLQESSTSGGGSSINELTETTISAR 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03723 885 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 208 IPR036426 -
Trre8g03723 885 CDD EGF_CA 314 348 - -
Trre8g03723 885 ProSiteProfiles EGF-like domain profile. 313 351 IPR000742 -
Trre8g03723 885 Pfam PAN-like domain 372 438 IPR003609 -
Trre8g03723 885 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 41 174 - -
Trre8g03723 885 MobiDBLite consensus disorder prediction 859 885 - -
Trre8g03723 885 Pfam D-mannose binding lectin 94 203 IPR001480 -
Trre8g03723 885 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 506 618 - -
Trre8g03723 885 SUPERFAMILY Protein kinase-like (PK-like) 525 846 IPR011009 -
Trre8g03723 885 PIRSF SRK 18 885 IPR024171 GO:0004674
Trre8g03723 885 CDD PAN_AP_plant 373 452 - -
Trre8g03723 885 ProSiteProfiles Protein kinase domain profile. 543 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03723 885 SMART ntp_6 373 452 IPR003609 -
Trre8g03723 885 ProSiteProfiles PAN/Apple domain profile. 372 453 IPR003609 -
Trre8g03723 885 MobiDBLite consensus disorder prediction 858 885 - -
Trre8g03723 885 ProSiteProfiles Bulb-type lectin domain profile. 46 174 IPR001480 -
Trre8g03723 885 CDD STKc_IRAK 549 842 - -
Trre8g03723 885 Pfam S-locus glycoprotein domain 236 349 IPR000858 GO:0048544
Trre8g03723 885 Pfam Protein tyrosine and serine/threonine kinase 545 837 IPR001245 GO:0004672|GO:0006468
Trre8g03723 885 ProSitePatterns Protein kinases ATP-binding region signature. 549 571 IPR017441 GO:0005524
Trre8g03723 885 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 34 831 - -
Trre8g03723 885 Gene3D Phosphorylase Kinase; domain 1 517 618 - -
Trre8g03723 885 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 619 848 - -
Trre8g03723 885 SMART blect_4 52 177 IPR001480 -
Trre8g03723 885 Gene3D Hepatocyte Growth Factor 370 450 - -
Trre8g03723 885 Gene3D Transferase(Phosphotransferase) domain 1 619 851 - -
Trre8g03723 885 CDD B_lectin 52 177 IPR001480 -
Trre8g03723 885 Gene3D - 39 174 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03723 Trre-Chr8 42419088 42427779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03723 531 885 Receptor kinase-like Gene Family AT4G11530 51.374 1.04e-112 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g03723 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03723 - - tpra:123918163 1382.85