Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03722 ATGGACTCTGCTAGAAATCTTCTCTACCTTGTCACAACCAAAAATCTTAAACACAAGCTAGTATTACATAAAATTTGGTTGCTTATAAACTCTTTGATTCTACTTATCACTTTCTCCTTTTGCTCTTGTTCTTCTGATATCATATCTGCTGATAAACCAATAAGAGATGGTGAGATTCTTGTTTCTAAATCTAAAACATTTGCTCTTGGATTCTTCACTCCAGCAAAGTCCACCTCTCGCTATGTCGGAATTTGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAATAGAGATAGTCCAATCAATGACACTTCTGGAATCCTATCGATCGACCGGAATGGAAATCTAGTACTGGACCACAACCTTAGCACCATTCCCATTTGGTCTACAAATGTTTCATTCCCACAATCACAAAGAAATAATACCAGTGTTGTTATAGCTCAGCTATCGGATATAGCAAACCTTGTTCTGATGCTAAACAACACAAAAACTGTTATCTGGGAGAGCTTTGATCATCCCACAGATACCTTGCTTCCATATCTAAAGGTTGGTTTTGATAGAAAAATTAATCAAAGTTGGTTCCTCCAATCATGGAAGACAGATGTTGACCCTGGAAAAGGCGCATTCACGTTGAAATTCAGCACTATTGGCAAACCTCAGTTGTTTATGTACAACCATGATCTTCCTTGGTGGTGTGGTGGACATTGGAACGGAGAATTATTAGTAGGTGTACCTAATATGAAACGAGATATGGCCACTTTTAACGTTTCTTTAGTTGAAGATGACAATCATGTAGCACTCGCATATAACATGTTTGATAAGTCTGTCATTACAAGGATAGTGGTTCAGCAATCCGGTTTCTTTCAAACATTCACATGGGACAGGCAAAAGACTCAATGGAACCGGTACTGGTCTGAACCAACAGACCAATGTGATAACTATGGAACATGTGGATCAAACAGTAATTGTGACCCTTTGAATTTTGAGGACTTTAAGTGTACTTGTTTACTTGGTTTTGAACCAAAATTTCCACGCGATTGGTATGAGAGTAGAGATGGGTCAGGAGGGTGTGTAAGGAAGAAAGGTGTACCTGTCTGTGATAAAGGAGAAGGGTTTGTCAAAATTGTAAGCTTGAAAGTTCCTGATACATCTGTGGCAGTTGCTAAAGGTGGTTTGAGTTTGGAGGAATGCGAGAAAGAATGTTTCAAAAACTGCTCTTGTACTGCCTATACAGTTGCTGATGTGAGGAATGGTGGAAGTGGTTGTTTGGCTTGGTATGGAGATTTAATGGACATTCAAAAACTTAGTGATCAAGGCCAAGATTTATTTTTACGCGTCAATGCTGTTGAACTAGCCAAAGCCAACAGAAGCAGAAAAGGAATCTTTGGTAGAAAGTGGTTGGCTGCGAATCTCGTAGTTTCTATAGTTACAATTGTCGTCCTCCTCTCATGTGTGTATTGCATGTGGAAGAAAAAAAGAAAGGATAAAATGCTGCAAGAATCATACCAAGATTCCTCGGGAGAAGAGATCGGTGCTCAAAGAAACACACATTCAAATCTACCCTTTTTCAGCTTTAAAACAATAATAACAGCTACAAGGAATTTTAATCAAGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGGTAGCAGTGAAAAGATTGTCCAGAGATTCAGGTCAAGGAAAAGAAGAGTTTAAAAATGAGGTTACACTTTTAGTTAAACTCCAACACAAAAATCTAGTGAGGCTGCTTGGTTGTTGTTGCGAAAAAGAAGAACGGATGCTAATTTATGAATACCTACCAAACAAAAGCCTAGACTTCTTTATATTCAATAAAAACCAAAGGTCATCGTTGGATCGGGGTAAGCGTTTTGAAATTATTTGTGGGATTGCTCGAGGTGTATTATATCTTCATCAAGATTCAAGGTTGAAAATAATTCATAGAGATCTAAAAGCCAGCAATGTTCTCCTTGATGCTGCAATGAATCCAAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAAATGAAATCCAAGCAAGAACAAAAAGAGTGGTCGGAACATATGGATATATGTCGCCGGAATATGCAATGGAAGGACGGTACTCAACAAAATCTGATGTCTTCAGTTATGGTGTCTTATTACTGGAGATTATTGCTGGCCAAAGAAATACACATTGTGAAATAGGAAGAGCTTCCCCGAATTTAATTGGACATGTGTGGACACTATGGACAGAAGGAAGAGCTTTGGATATAGTTGATCCAGCACTAAACCAATCTTATCCTTCGGCTATAGTTATGAGATGCATTCAAATTGGACTTTTGTGTGTGCAAGAAAATGCCATGAATAGGCCAACAATGTCAGAAGTTGCTTTCATGCTATGCAATGAAACACCTCTTTGCCAACCTCAAAAACCAGCATTCTTATTGATTGGCAAACAAGATTTGCAAGATTCGTCAACATCAGGAGGAGGATCTTCAATAAATGAAGTAACAGAAACTACCATCAGTGGCCGCTAA 2565 0.3848 MDSARNLLYLVTTKNLKHKLVLHKIWLLINSLILLITFSFCSCSSDIISADKPIRDGEILVSKSKTFALGFFTPAKSTSRYVGIWYNNLPIQTVVWVANRDSPINDTSGILSIDRNGNLVLDHNLSTIPIWSTNVSFPQSQRNNTSVVIAQLSDIANLVLMLNNTKTVIWESFDHPTDTLLPYLKVGFDRKINQSWFLQSWKTDVDPGKGAFTLKFSTIGKPQLFMYNHDLPWWCGGHWNGELLVGVPNMKRDMATFNVSLVEDDNHVALAYNMFDKSVITRIVVQQSGFFQTFTWDRQKTQWNRYWSEPTDQCDNYGTCGSNSNCDPLNFEDFKCTCLLGFEPKFPRDWYESRDGSGGCVRKKGVPVCDKGEGFVKIVSLKVPDTSVAVAKGGLSLEECEKECFKNCSCTAYTVADVRNGGSGCLAWYGDLMDIQKLSDQGQDLFLRVNAVELAKANRSRKGIFGRKWLAANLVVSIVTIVVLLSCVYCMWKKKRKDKMLQESYQDSSGEEIGAQRNTHSNLPFFSFKTIITATRNFNQENKLGQGGFGSVYKGCLVNGQEVAVKRLSRDSGQGKEEFKNEVTLLVKLQHKNLVRLLGCCCEKEERMLIYEYLPNKSLDFFIFNKNQRSSLDRGKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGENEIQARTKRVVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIIAGQRNTHCEIGRASPNLIGHVWTLWTEGRALDIVDPALNQSYPSAIVMRCIQIGLLCVQENAMNRPTMSEVAFMLCNETPLCQPQKPAFLLIGKQDLQDSSTSGGGSSINEVTETTISGR 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03722 854 Pfam D-mannose binding lectin 93 202 IPR001480 -
Trre8g03722 854 Pfam Protein tyrosine and serine/threonine kinase 540 806 IPR001245 GO:0004672|GO:0006468
Trre8g03722 854 Gene3D Hepatocyte Growth Factor 367 447 - -
Trre8g03722 854 CDD B_lectin 51 176 IPR001480 -
Trre8g03722 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Trre8g03722 854 ProSiteProfiles EGF-like domain profile. 310 348 IPR000742 -
Trre8g03722 854 ProSiteProfiles Protein kinase domain profile. 538 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03722 854 Gene3D - 39 173 IPR036426 -
Trre8g03722 854 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 502 613 - -
Trre8g03722 854 Gene3D Phosphorylase Kinase; domain 1 513 613 - -
Trre8g03722 854 MobiDBLite consensus disorder prediction 832 854 - -
Trre8g03722 854 ProSiteProfiles PAN/Apple domain profile. 369 450 IPR003609 -
Trre8g03722 854 SMART ntp_6 370 449 IPR003609 -
Trre8g03722 854 Pfam PAN-like domain 369 435 IPR003609 -
Trre8g03722 854 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 40 173 - -
Trre8g03722 854 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 32 800 - -
Trre8g03722 854 CDD PAN_AP_plant 369 449 - -
Trre8g03722 854 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 614 817 - -
Trre8g03722 854 ProSitePatterns Protein kinases ATP-binding region signature. 544 566 IPR017441 GO:0005524
Trre8g03722 854 PIRSF SRK 17 854 IPR024171 GO:0004674
Trre8g03722 854 CDD STKc_IRAK 544 811 - -
Trre8g03722 854 SMART serkin_6 538 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03722 854 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 207 IPR036426 -
Trre8g03722 854 Gene3D Transferase(Phosphotransferase) domain 1 614 817 - -
Trre8g03722 854 SMART blect_4 51 176 IPR001480 -
Trre8g03722 854 SUPERFAMILY Protein kinase-like (PK-like) 520 820 IPR011009 -
Trre8g03722 854 Pfam S-locus glycoprotein domain 234 346 IPR000858 GO:0048544
Trre8g03722 854 ProSiteProfiles Bulb-type lectin domain profile. 45 173 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03722 Trre-Chr8 42413837 42417716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03722 502 853 Receptor kinase-like Gene Family AT4G11530 54.237 4.25e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g03722 PK_Tyr_Ser-Thr 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03722 - - tpra:123914661 1550.41