Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03716 ATGGGCAAGATCATAGGATTCAAAGTTTCATTCTTTATGTTGTTGTTCTTGTCTTTCCTCTGTTTTTATCCTCTGTTTTTGCATGCTGCTAACTCGATTACACAGAATGAATCTATCAAAGATGGTTCCACTTTGGTGTCAGATGGTCTTAAATTCGAAATGGGTTTCTTCAGTTTGAATGATTCCTCTTCAAGATACGTTGGAATTTGGTATCACAACGTTGCTTCAGCATATGTGTGGGTTGCAAACAGAGAAAAACCTATCAAAAACAGAGAAGGGTCTATCACAATAAAAAATGATGGAAACTTGGTTGTTCTTGATGGAGAAAACAATGAAATTTGGTCAAGTAACGTATCGAAAACTCCGATAAATAACTCACATGTTGTTCTTGATAACGATGGAAATCTTGTTCTTTCAGATAGAGATATTAACAAAGATATTTGGCAAAGTTTTGAAGATCCAACTGATACATATCTTCCTGGTATGAAAGTTCCGGCGAGCGGTGGAAATGGAATTGGAAAGGATGCTACTTTTTGTTCATGGAAATCAGAGAATGATCCTTCATTTGGAAACTATTCAATGAGTGTTGATTCTGAAGCATCACCACAGATAGTGATAATGGAAGGAGAAAAAAGAAGGTGGAGAAGTGGTTATTGGGATGGTAGAGTTTTTACAGGTGTACCAAATATGACAGGAAGTTATCTTTTCGGCTTTCGGCTTAACACGGATGAGAATGGTGGAAGGTATTTTGTTTATGAAGCATTGAATAGTACTGATAAGATAAGGTTTCTGATTAGTTATGATGGATTTGAGAAACAATTTAGGTGGAATGAAAATGAGAAAAAATGGAATGTGTTACAAAGTCAGCCTTTTAAGAAGTGTGAGTTTTATAATCCATGTGGTAGTTTTGCAGTATGTGATGAGTCTGATTCAAGTTTGTGTAAGTGCATAAAAGGGTTTGAACCAAGGGATATGAATGGTTGGAAAATTGGGAATTGGTCAAAAGGGTGTAAGAGGATGACACCATTGAAAGGTGAGAGAAGTAGTAATAGTTCTGGTGGAGAAGATGGTTTTTTGGTGCAAAGGGATTTGAAGTTACCTGATTTTGCACATTTGGTGAGTGCTGTTGATAGTAAGGATTGTGAAGATAATTGTGTGAAGAATAGTTCTTGTACTGCTTATGCTAATGCTATTGGAATTGGGTGCATGGTTTGGTTTGGGGATTTAGTTGATTTTCAAAGGTTAGAAAATTTTGGAAATACACTCAACATTCGTCTTGCTGATTCCGATTTAGGTGATGGGGGGAAAAAGACCAAAATTGGGATAATACTAGGTGTTGTGGGGGGGCTTATCTTCCTTGGAATCTTTGTATGGCTTCTATGGAGGTTTAAGAGAAAACTCAAAGTTTCCTCAACTTCTTCTTCCAACATTAATGGTGATGTACCAGTTTCTGAACCATCCAAGAGTGCAAACTTATTACTATCACCAGAATTATCAGGACCACTTGGTCTAAGTCCGGACGGGAATCCACTTAATAATGCAGAACTTTCATTCATCAATTTTAGTATCATCGTAGTAGCAACAAACAATTTTTCAGAAGAAAATAAGCTTGGACAAGGTGGATTTGGTCCTGTTTACAAGGGAAAGCTTCCCGGGGGAGAAGAAATTGCGGTCAAGAGGCTTTCTAGACAGTCGAACCAAGGATCGGACGAGTTCAAGAATGAAATGATGCTTATAGCCAAATTACAGCATAGAAATCTTGTTAGACTATTGGGATGTTCAATTGAAGGCGAAGAAAAGTTACTGGTGTATGAGTACATGCCAAACAAAAGTTTGGACCGCTTTCTATTTGATCCAGTCAAGCAAACAATACTCGATTGTACAAAACGTTTTGAAATCATTGAGGGAATTGCAAGAGGACTACTTTATTTGCACCGTGATTCTCGGCTTAGAATAATCCATCGTGATCTTAAAGCAAGCAACATTTTGTTGGATGAAAATATGAATCCAAAAATTTCAGACTTCGGCTTGGCTAGGATATTTGGAGGAAACCAAAATGAAGATAATACAGTCAAAGTCGTTGGTACATATGGTTATATGTCTCCTGAATATGCAATGGAAGGTCTATTTTCGGTCAAATCTGATGTCTATAGTTTTGGCGTACTACTACTAGAGATTTTGAGCGGTCGCAAAAACACCAGCTTTCGTGATTCTTATGACCCAAGTCTCATAGGATATGCGTGGCGTCTATGGAATGAAGAGAGAGTAATGGAGCTTCTTGATCCTTCGATCCGTGATTCAAGTCCAAAGAGTAAAGCTTTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCATCTCATAGACCAAACATGTCATCAGTGGTGTTGATGTTAGAAAGTGAGGCAACAACTCTTCCTTTGCCTGTCAAACCTTTGCTTACTTCCATGAGAAGATATGATGATACAGAAGAATTTCATACTGAACCCTTTGATTCCACAGCTGATCTTACAGTGACAGGAAGATAA 2535 0.3775 MGKIIGFKVSFFMLLFLSFLCFYPLFLHAANSITQNESIKDGSTLVSDGLKFEMGFFSLNDSSSRYVGIWYHNVASAYVWVANREKPIKNREGSITIKNDGNLVVLDGENNEIWSSNVSKTPINNSHVVLDNDGNLVLSDRDINKDIWQSFEDPTDTYLPGMKVPASGGNGIGKDATFCSWKSENDPSFGNYSMSVDSEASPQIVIMEGEKRRWRSGYWDGRVFTGVPNMTGSYLFGFRLNTDENGGRYFVYEALNSTDKIRFLISYDGFEKQFRWNENEKKWNVLQSQPFKKCEFYNPCGSFAVCDESDSSLCKCIKGFEPRDMNGWKIGNWSKGCKRMTPLKGERSSNSSGGEDGFLVQRDLKLPDFAHLVSAVDSKDCEDNCVKNSSCTAYANAIGIGCMVWFGDLVDFQRLENFGNTLNIRLADSDLGDGGKKTKIGIILGVVGGLIFLGIFVWLLWRFKRKLKVSSTSSSNINGDVPVSEPSKSANLLLSPELSGPLGLSPDGNPLNNAELSFINFSIIVVATNNFSEENKLGQGGFGPVYKGKLPGGEEIAVKRLSRQSNQGSDEFKNEMMLIAKLQHRNLVRLLGCSIEGEEKLLVYEYMPNKSLDRFLFDPVKQTILDCTKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEDNTVKVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEILSGRKNTSFRDSYDPSLIGYAWRLWNEERVMELLDPSIRDSSPKSKALRCIHIGMLCVQDSASHRPNMSSVVLMLESEATTLPLPVKPLLTSMRRYDDTEEFHTEPFDSTADLTVTGR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03716 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 151 - -
Trre8g03716 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 505 606 - -
Trre8g03716 844 SUPERFAMILY Protein kinase-like (PK-like) 518 826 IPR011009 -
Trre8g03716 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 607 809 - -
Trre8g03716 844 Gene3D Transferase(Phosphotransferase) domain 1 607 808 - -
Trre8g03716 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
Trre8g03716 844 CDD B_lectin 36 154 IPR001480 -
Trre8g03716 844 ProSiteProfiles PAN/Apple domain profile. 337 427 IPR003609 -
Trre8g03716 844 Pfam D-mannose binding lectin 78 182 IPR001480 -
Trre8g03716 844 CDD STKc_IRAK 537 802 - -
Trre8g03716 844 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Trre8g03716 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Trre8g03716 844 SMART serkin_6 531 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03716 844 Pfam PAN-like domain 354 411 IPR003609 -
Trre8g03716 844 SMART ntp_6 353 426 IPR003609 -
Trre8g03716 844 ProSiteProfiles Protein kinase domain profile. 531 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g03716 844 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Trre8g03716 844 CDD PAN_AP_plant 351 427 - -
Trre8g03716 844 Gene3D Phosphorylase Kinase; domain 1 508 606 - -
Trre8g03716 844 Pfam Protein tyrosine and serine/threonine kinase 534 799 IPR001245 GO:0004672|GO:0006468
Trre8g03716 844 PIRSF SRK 3 843 IPR024171 GO:0004674
Trre8g03716 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 792 - -
Trre8g03716 844 Gene3D - 26 151 IPR036426 -
Trre8g03716 844 SMART blect_4 36 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03716 Trre-Chr8 42362317 42365852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03716 507 814 Receptor kinase-like Gene Family AT4G23230 60.841 2.42e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g03716 PK_Tyr_Ser-Thr 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03716 - - cam:101504189 1337.4