Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre8g03716 | ATGGGCAAGATCATAGGATTCAAAGTTTCATTCTTTATGTTGTTGTTCTTGTCTTTCCTCTGTTTTTATCCTCTGTTTTTGCATGCTGCTAACTCGATTACACAGAATGAATCTATCAAAGATGGTTCCACTTTGGTGTCAGATGGTCTTAAATTCGAAATGGGTTTCTTCAGTTTGAATGATTCCTCTTCAAGATACGTTGGAATTTGGTATCACAACGTTGCTTCAGCATATGTGTGGGTTGCAAACAGAGAAAAACCTATCAAAAACAGAGAAGGGTCTATCACAATAAAAAATGATGGAAACTTGGTTGTTCTTGATGGAGAAAACAATGAAATTTGGTCAAGTAACGTATCGAAAACTCCGATAAATAACTCACATGTTGTTCTTGATAACGATGGAAATCTTGTTCTTTCAGATAGAGATATTAACAAAGATATTTGGCAAAGTTTTGAAGATCCAACTGATACATATCTTCCTGGTATGAAAGTTCCGGCGAGCGGTGGAAATGGAATTGGAAAGGATGCTACTTTTTGTTCATGGAAATCAGAGAATGATCCTTCATTTGGAAACTATTCAATGAGTGTTGATTCTGAAGCATCACCACAGATAGTGATAATGGAAGGAGAAAAAAGAAGGTGGAGAAGTGGTTATTGGGATGGTAGAGTTTTTACAGGTGTACCAAATATGACAGGAAGTTATCTTTTCGGCTTTCGGCTTAACACGGATGAGAATGGTGGAAGGTATTTTGTTTATGAAGCATTGAATAGTACTGATAAGATAAGGTTTCTGATTAGTTATGATGGATTTGAGAAACAATTTAGGTGGAATGAAAATGAGAAAAAATGGAATGTGTTACAAAGTCAGCCTTTTAAGAAGTGTGAGTTTTATAATCCATGTGGTAGTTTTGCAGTATGTGATGAGTCTGATTCAAGTTTGTGTAAGTGCATAAAAGGGTTTGAACCAAGGGATATGAATGGTTGGAAAATTGGGAATTGGTCAAAAGGGTGTAAGAGGATGACACCATTGAAAGGTGAGAGAAGTAGTAATAGTTCTGGTGGAGAAGATGGTTTTTTGGTGCAAAGGGATTTGAAGTTACCTGATTTTGCACATTTGGTGAGTGCTGTTGATAGTAAGGATTGTGAAGATAATTGTGTGAAGAATAGTTCTTGTACTGCTTATGCTAATGCTATTGGAATTGGGTGCATGGTTTGGTTTGGGGATTTAGTTGATTTTCAAAGGTTAGAAAATTTTGGAAATACACTCAACATTCGTCTTGCTGATTCCGATTTAGGTGATGGGGGGAAAAAGACCAAAATTGGGATAATACTAGGTGTTGTGGGGGGGCTTATCTTCCTTGGAATCTTTGTATGGCTTCTATGGAGGTTTAAGAGAAAACTCAAAGTTTCCTCAACTTCTTCTTCCAACATTAATGGTGATGTACCAGTTTCTGAACCATCCAAGAGTGCAAACTTATTACTATCACCAGAATTATCAGGACCACTTGGTCTAAGTCCGGACGGGAATCCACTTAATAATGCAGAACTTTCATTCATCAATTTTAGTATCATCGTAGTAGCAACAAACAATTTTTCAGAAGAAAATAAGCTTGGACAAGGTGGATTTGGTCCTGTTTACAAGGGAAAGCTTCCCGGGGGAGAAGAAATTGCGGTCAAGAGGCTTTCTAGACAGTCGAACCAAGGATCGGACGAGTTCAAGAATGAAATGATGCTTATAGCCAAATTACAGCATAGAAATCTTGTTAGACTATTGGGATGTTCAATTGAAGGCGAAGAAAAGTTACTGGTGTATGAGTACATGCCAAACAAAAGTTTGGACCGCTTTCTATTTGATCCAGTCAAGCAAACAATACTCGATTGTACAAAACGTTTTGAAATCATTGAGGGAATTGCAAGAGGACTACTTTATTTGCACCGTGATTCTCGGCTTAGAATAATCCATCGTGATCTTAAAGCAAGCAACATTTTGTTGGATGAAAATATGAATCCAAAAATTTCAGACTTCGGCTTGGCTAGGATATTTGGAGGAAACCAAAATGAAGATAATACAGTCAAAGTCGTTGGTACATATGGTTATATGTCTCCTGAATATGCAATGGAAGGTCTATTTTCGGTCAAATCTGATGTCTATAGTTTTGGCGTACTACTACTAGAGATTTTGAGCGGTCGCAAAAACACCAGCTTTCGTGATTCTTATGACCCAAGTCTCATAGGATATGCGTGGCGTCTATGGAATGAAGAGAGAGTAATGGAGCTTCTTGATCCTTCGATCCGTGATTCAAGTCCAAAGAGTAAAGCTTTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCATCTCATAGACCAAACATGTCATCAGTGGTGTTGATGTTAGAAAGTGAGGCAACAACTCTTCCTTTGCCTGTCAAACCTTTGCTTACTTCCATGAGAAGATATGATGATACAGAAGAATTTCATACTGAACCCTTTGATTCCACAGCTGATCTTACAGTGACAGGAAGATAA | 2535 | 0.3775 | MGKIIGFKVSFFMLLFLSFLCFYPLFLHAANSITQNESIKDGSTLVSDGLKFEMGFFSLNDSSSRYVGIWYHNVASAYVWVANREKPIKNREGSITIKNDGNLVVLDGENNEIWSSNVSKTPINNSHVVLDNDGNLVLSDRDINKDIWQSFEDPTDTYLPGMKVPASGGNGIGKDATFCSWKSENDPSFGNYSMSVDSEASPQIVIMEGEKRRWRSGYWDGRVFTGVPNMTGSYLFGFRLNTDENGGRYFVYEALNSTDKIRFLISYDGFEKQFRWNENEKKWNVLQSQPFKKCEFYNPCGSFAVCDESDSSLCKCIKGFEPRDMNGWKIGNWSKGCKRMTPLKGERSSNSSGGEDGFLVQRDLKLPDFAHLVSAVDSKDCEDNCVKNSSCTAYANAIGIGCMVWFGDLVDFQRLENFGNTLNIRLADSDLGDGGKKTKIGIILGVVGGLIFLGIFVWLLWRFKRKLKVSSTSSSNINGDVPVSEPSKSANLLLSPELSGPLGLSPDGNPLNNAELSFINFSIIVVATNNFSEENKLGQGGFGPVYKGKLPGGEEIAVKRLSRQSNQGSDEFKNEMMLIAKLQHRNLVRLLGCSIEGEEKLLVYEYMPNKSLDRFLFDPVKQTILDCTKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEDNTVKVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEILSGRKNTSFRDSYDPSLIGYAWRLWNEERVMELLDPSIRDSSPKSKALRCIHIGMLCVQDSASHRPNMSSVVLMLESEATTLPLPVKPLLTSMRRYDDTEEFHTEPFDSTADLTVTGR | 844 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre8g03716 | 844 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 26 | 151 | - | - | |
Trre8g03716 | 844 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 505 | 606 | - | - | |
Trre8g03716 | 844 | SUPERFAMILY | Protein kinase-like (PK-like) | 518 | 826 | IPR011009 | - | |
Trre8g03716 | 844 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 607 | 809 | - | - | |
Trre8g03716 | 844 | Gene3D | Transferase(Phosphotransferase) domain 1 | 607 | 808 | - | - | |
Trre8g03716 | 844 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 78 | 187 | IPR036426 | - | |
Trre8g03716 | 844 | CDD | B_lectin | 36 | 154 | IPR001480 | - | |
Trre8g03716 | 844 | ProSiteProfiles | PAN/Apple domain profile. | 337 | 427 | IPR003609 | - | |
Trre8g03716 | 844 | Pfam | D-mannose binding lectin | 78 | 182 | IPR001480 | - | |
Trre8g03716 | 844 | CDD | STKc_IRAK | 537 | 802 | - | - | |
Trre8g03716 | 844 | ProSiteProfiles | Bulb-type lectin domain profile. | 30 | 151 | IPR001480 | - | |
Trre8g03716 | 844 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 652 | 664 | IPR008271 | GO:0004672|GO:0006468 | |
Trre8g03716 | 844 | SMART | serkin_6 | 531 | 801 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre8g03716 | 844 | Pfam | PAN-like domain | 354 | 411 | IPR003609 | - | |
Trre8g03716 | 844 | SMART | ntp_6 | 353 | 426 | IPR003609 | - | |
Trre8g03716 | 844 | ProSiteProfiles | Protein kinase domain profile. | 531 | 816 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre8g03716 | 844 | Pfam | S-locus glycoprotein domain | 214 | 323 | IPR000858 | GO:0048544 | |
Trre8g03716 | 844 | CDD | PAN_AP_plant | 351 | 427 | - | - | |
Trre8g03716 | 844 | Gene3D | Phosphorylase Kinase; domain 1 | 508 | 606 | - | - | |
Trre8g03716 | 844 | Pfam | Protein tyrosine and serine/threonine kinase | 534 | 799 | IPR001245 | GO:0004672|GO:0006468 | |
Trre8g03716 | 844 | PIRSF | SRK | 3 | 843 | IPR024171 | GO:0004674 | |
Trre8g03716 | 844 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 16 | 792 | - | - | |
Trre8g03716 | 844 | Gene3D | - | 26 | 151 | IPR036426 | - | |
Trre8g03716 | 844 | SMART | blect_4 | 36 | 154 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre8g03716 | Trre-Chr8 | 42362317 | 42365852 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre8g03716 | 507 | 814 | Receptor kinase-like Gene Family | AT4G23230 | 60.841 | 2.42e-129 | 399 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Trre8g03716 | PK_Tyr_Ser-Thr | 1.4e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre8g03716 | - | - | cam:101504189 | 1337.4 |