Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03703 ATGAATGCTGGATTACAAAGGTGTGGAAAAAGTTGTCGTCTGCGTTGGACAAACTATCTTCGACCAGATATAAAGCGAGGTCGATTCTCTTTTGAAGAAGAAGAAACCATAATTCAGCTACATAGCATTCTCGGCAACAAGTGGTCTGCAATTGCTGCTAGGCTACCAGGAAGAACGGACAATGAAATCAAGAATTATTGGAACACTCATATTAGGAAAAGATTATTAAGGATGGGAATTGATCCTGTGACACATAATCCAAGATTTGATCTTTTGGACTTTTCTTCTATCCAAAATTCATCTCTATCACAAATGAACATTCAAAGGCTAATTGGTACACAACAATTAGGGAACCCTCATGAGATTCTAAAGTTTGCTTCATCACTCTTTTCCTCTCAAAATGGACAAGAGAATCACCAAATTGATCAAAATCAACAAATTATCTCACACTTGGATCAAGAAGCTTACAATATGTTGTTGAATAATCCACCTTGTGATAATTCAATGACTTTGCCTCAAACACACTTGGTTGAATCAAATGAGAATCTATACTCATCATTTTTACCTGAATTTTGCTACCAACAACATGAACATGTTCAATTAAGTGATTATTTGCATTGCAATGGAATTGCTCCAAGTACTATAACAGAGAATTTTGTTCATCAATTACCAAGCTATGATTACTTAAGTTCTGATTATCATGGAAATGGCATAATTATGGATCCTATCATATCAGAAACCTCAAACTTTCATTCCAATAACAACAATCAGAACTTCAATTTCGCTTCTTCGGTTCTATCTACGCCTTCATCGAGTACCACACCGTTGAATTCGAATTCGACAAATATCAATGGAAGCAGTATCACTGAAGATGAGACAGAAAGCTATGTTAGCAGCAACATGTTTCAATTTCAAATCTCAGATATCTTAGGTGTGAATGAGTTCATGTAG 951 0.3544 MNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHNPRFDLLDFSSIQNSSLSQMNIQRLIGTQQLGNPHEILKFASSLFSSQNGQENHQIDQNQQIISHLDQEAYNMLLNNPPCDNSMTLPQTHLVESNENLYSSFLPEFCYQQHEHVQLSDYLHCNGIAPSTITENFVHQLPSYDYLSSDYHGNGIIMDPIISETSNFHSNNNNQNFNFASSVLSTPSSSTTPLNSNSTNINGSSITEDETESYVSSNMFQFQISDILGVNEFM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03703 316 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Trre8g03703 316 SMART sant 25 73 IPR001005 -
Trre8g03703 316 FunFam Transcription factor MYB39 28 89 - -
Trre8g03703 316 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 241 - -
Trre8g03703 316 MobiDBLite consensus disorder prediction 270 289 - -
Trre8g03703 316 Gene3D - 28 75 - -
Trre8g03703 316 CDD SANT 28 71 IPR001005 -
Trre8g03703 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
Trre8g03703 316 Gene3D - 3 25 - -
Trre8g03703 316 SUPERFAMILY Homeodomain-like 6 79 IPR009057 -
Trre8g03703 316 Pfam Myb-like DNA-binding domain 26 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03703 Trre-Chr8 42097268 42098476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03703 2 316 MYB Transcription Factor Family AT4G21440 50.450 9.53e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre8g03703 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03703 K09422 - gmx:778071 306.605