LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre8g03666	ATGCATGGGAGGTACGTTGATATGCCGAGGGAGAAGAGAAGTTTGGATTCCAGTTCCGGTGAAGATGGACAGCCTGATCGGAAACGTCCTGCTTTAGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTGCAGAAACTGTGTTCATCATTGGAGCCTATTCTACGTAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGTCCAACCAAGCTTAATGGGAGGTCTTCTCCAAAGCGCATAGAAAGCTCTGATGGCAAAAATTTACAATTGCACTTCAAGACCAGACTATCCCTTCCCCTTTTTACTGGTGGGAAAGTGGAGGGTGAGCATGGGGCAACCATACATATTGTTTTGGTTGATGCAAACTCAGGCCAAGTTGTCGCATCAGGCCCAGAGTCATGTGCCAAATTAGATGTCTTTGTTCTTGAGGGGGATTTCAATAACGAGGATGATGAAAATTGGGGTGAAGAAGAGTTTGAGAGTCATATTGTGAAAGAGCGAGAAGGAAAAAGGCCACTTCTGTCTGGCGATCTGCAAGTCATACTAAAGGAGGGTGTAGGGACACTGGGTGAGCTCTCATTTACTGACAACTCCAGCTGGATAAGGAGTAGGAAGTTCAGATTGGGGCTGAAAGTTGCCTCAGGTTTTGGTGAAGGAATGCGTATTCGTGAAGCCAAATCAGAAGCCTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTATCCACCTGCCTTGCATGATGAGGTTTGGAGACTGGAGAAGATTGGTAAGGATGGTTCATTTCACAAAAGACTAAATAAAGCAGGAATATTTAATGTTGAAGACTTTTTAAGACTTGTGATCAGAGACTCTCAGAGATTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATATCCTTGTTGAGCATGCAAAGACTTGTGTACTCGGTGGAAAACTCTATGTATATTATCCTGAGGATGCAAGAAATGTTGGTGTTGTTTTCAATCACATTTATGAATTGAGCGGCTTAATTGCCAATGACCAGTATTACTCAGCTGATTCTCTCTCTGAGAGTCAAAAGGCTTATGTGGACACGTTGGTGAAGCAAGCGTATGATAATTGGATGCATGTTATTGAGTATGATGGGAAGTCTCTACAAAATTGCAATCAGGATCAAAGTTTGGATACTGCTCATCCTCAAGCTCTCATGGGTTCCCTTGAGTACTCGAACTCAGTTCAGCAGACTTCTATCCATAGTTTGCCACAACCAGAACATAGAGGCCAACCTTCAATGGATACAGGAGCAACAGTTGGAGGTTATCATGACGGCACAACTACCAGCTTCTCCATGCAATCACAGAATACTAATCTTAATTCTTCTATCCAATTTGATGATAATGCATTTTCACTACAAAGCCAGTTGATGAGTGTTCCCCACCAAGTTCAACTTCCAAGAAATGAAAATGGGCTAAGTCTTGGTCTGCCACAAGCAGCCACACATGGGTTCCAGACTGCCAGCATTTCAAATTCGACTTACGGAGGAGTTGAAGACTTCTTCCCAGAGGAAGAAATACGTATTAAAAGTCAAGAGATGCTAGAGAATGAAGATATGCAGCATCTTCTCCGTATTTTTAACTTGGGAAGCCATGCACATGCATCCTTCAATGCTCACGAAGATGGGTACCCTAATTCATCTGCTTACATGCCTGCAAACCACATGAGCTACAACTTTGATGATGAGCCAAACCGTTCCTCAGGCAAAGCTGTTGTGGGATGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGTATTTTTGTTCGGAAGAGGGCTGCTGACAGACGGGCTCAACTCATTGAATTAGATGACTCTTAA	1884	0.4352	MHGRYVDMPREKRSLDSSSGEDGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPTKLNGRSSPKRIESSDGKNLQLHFKTRLSLPLFTGGKVEGEHGATIHIVLVDANSGQVVASGPESCAKLDVFVLEGDFNNEDDENWGEEEFESHIVKEREGKRPLLSGDLQVILKEGVGTLGELSFTDNSSWIRSRKFRLGLKVASGFGEGMRIREAKSEAFTVKDHRGELYKKHYPPALHDEVWRLEKIGKDGSFHKRLNKAGIFNVEDFLRLVIRDSQRLRNILGSGMSNKMWDILVEHAKTCVLGGKLYVYYPEDARNVGVVFNHIYELSGLIANDQYYSADSLSESQKAYVDTLVKQAYDNWMHVIEYDGKSLQNCNQDQSLDTAHPQALMGSLEYSNSVQQTSIHSLPQPEHRGQPSMDTGATVGGYHDGTTTSFSMQSQNTNLNSSIQFDDNAFSLQSQLMSVPHQVQLPRNENGLSLGLPQAATHGFQTASISNSTYGGVEDFFPEEEIRIKSQEMLENEDMQHLLRIFNLGSHAHASFNAHEDGYPNSSAYMPANHMSYNFDDEPNRSSGKAVVGWLKLKAALRWGIFVRKRAADRRAQLIELDDS	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre8g03666	627	MobiDBLite	consensus disorder prediction	419	449	-	-
	Trre8g03666	627	PANTHER	OS02G0177800 PROTEIN	10	542	IPR012416	GO:0005516
	Trre8g03666	627	Pfam	Calmodulin binding protein central domain	252	318	IPR046830	-
	Trre8g03666	627	Pfam	Calmodulin binding protein C-terminal domain	323	385	IPR046829	-
	Trre8g03666	627	MobiDBLite	consensus disorder prediction	1	28	-	-
	Trre8g03666	627	MobiDBLite	consensus disorder prediction	1	30	-	-
	Trre8g03666	627	Pfam	Calmodulin binding protein-like N-terminal domain	93	240	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre8g03666	Trre-Chr8	41332164	41336691	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre8g03666	7	622	Calmodulin-binding Proteins	AT5G57580	60.031	0.0	734

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre8g03666	-		-	gmx:100812605	1020.76