Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03632 ATGGACAGCACAGATTCTTCATCATGCTCTCAGCATCCACACCTTCCACCAGGCTTTAGATTCCACCCAACTGATGAAGAACTTGTCGTTCATTACCTCAAGAGAAAAGCTTCATCAGCACCTCTTCCAGTAGCAATCATAGCAGATATTGATCTCTACAAATTCGACCCATGGGAACTCCCAAGTAAAGCAACTTTTGGGGAACAAGAATGGTACTTTTTTAGCCCAAGGGATAGGAAATACCCAAATGGGGCCCGGCCCAATAGGGCTGCAACTTCTGGGTATTGGAAAGCTACTGGAACTGATAAGCCTATATTAACATCTGATGGGAATCAGAAAGTTGGGGTTAAGAAAGCACTTGTTTTTTATGGAGGGAAGCCACCAAAAGGGGTTAAAACTAATTGGATTATGCATGAGTATAGGCTAATCACAGATCACAATAATATTAGTAATAATCATTCCTATAATGCAAGTTCAAAAACTCCTCCTCTGCCTTCTTCTGATCATCCTCCAAACAATAACAAGAAGAATTCTTTGAGGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAGTAGCACCATGCCAAGGCCACCACTAATGGATCAATATGATAAGGATCTTTCAATGGAACATACATATAATATGCAACAAAGCTCTAAACCTCAATGTTCAAGAAGCACAAGTTATGGACTTGAAAATGATGACAATTTCTTTGAAGGAATCTTAGCAGCTGATCAAGGAATGCAAAATGGTTGTAACATAAACTCAAAGGGTGATGATGATCATAACATTGAATCATTCCCTATGAAACGTGCACTAAATGCATCATCACAATTTTGGAATGAAACAGGTTCACCAGGGTCATCTTCTTCAAGTAAGCGATTCCATGGAGATCTTAATAATGGAAATAGCAATGTTGAGGAAAATAATTCATTTGTTTCTTTGCTTAGCCAGCTTCCACCAAACACAACTTTTCATCAAAATTCAATTCTTGGGGATGGTGTAATGAGGCAACAATTTCAACTTCCGGACATAAATTGGAACTAA 1059 0.3872 MDSTDSSSCSQHPHLPPGFRFHPTDEELVVHYLKRKASSAPLPVAIIADIDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLITDHNNISNNHSYNASSKTPPLPSSDHPPNNNKKNSLRLDDWVLCRIYKKSNSSTMPRPPLMDQYDKDLSMEHTYNMQQSSKPQCSRSTSYGLENDDNFFEGILAADQGMQNGCNINSKGDDDHNIESFPMKRALNASSQFWNETGSPGSSSSSKRFHGDLNNGNSNVEENNSFVSLLSQLPPNTTFHQNSILGDGVMRQQFQLPDINWN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03632 352 MobiDBLite consensus disorder prediction 151 178 - -
Trre8g03632 352 MobiDBLite consensus disorder prediction 1 20 - -
Trre8g03632 352 Gene3D NAC domain 24 197 IPR036093 GO:0003677|GO:0006355
Trre8g03632 352 ProSiteProfiles NAC domain profile. 15 192 IPR003441 GO:0003677|GO:0006355
Trre8g03632 352 FunFam NAC transcription factor 56 24 197 - -
Trre8g03632 352 SUPERFAMILY NAC domain 10 192 IPR036093 GO:0003677|GO:0006355
Trre8g03632 352 MobiDBLite consensus disorder prediction 283 310 - -
Trre8g03632 352 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Trre8g03632 352 PANTHER NAC TRANSCRIPTION FACTOR 56 15 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03632 Trre-Chr8 40885503 40887463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03632 5 352 NAC Transcription Factor Family AT1G61110 53.611 4.75e-112 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre8g03632 NAM 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03632 - - gmx:100797132 491.886