Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03630 ATGGCAAGTGAGATATTGAACTCTGCATTTCAAGAGATGATGCAGCCGGTTGAAGCTAAATCAAATATCTATATGAAAGTTAACTCACCTGTTACCCTCAAGTTTGAAGATATTGTGCATAAATTCAAAACTAGCAAAAGGGAAGGCTTGTTCTTCAAAAAGGAGATAAATTCTGAGGAGAGACTAATCTTGAAAGGGATCAGTGGCATTGTATTTCCAGGTGAATTGTTAGCAATTTTAGGCCCTTCAGGTAGTGGCAAATCAACTCTAATAAATGCTTTAGGAGGAAAGCTAAATGATAGTAATATAACAAAAGGAACCATAACCTACAATGGTAAACCACTCTCAAAATCAGTGAAACAAAACTTAGGATTTGTTGCTCAACATGACATCTTCTATCCTCACTTATCAGTATACGAAACACTAGTCTTTTCCGCGCTTCTTCGGTTGCCGAATAGTCTCTCGAAACAAGAGAAAATATCAAAAGTTAAAGAAGTTATAGATGAGCTTGAGTTGAATCATTGTAAGGATACTATAATAGGAGGTCCACTTTTAAGAGGTGTTTCAGGTGGAGAAATGAAGAGAGTTAGTATAGGGCAAGAATTGTTGACTAATCCAAGTTTATTGCTTGTTGATGAAGCTACTACAGGTCTTGATTCAACCACAGCTAGAAAACTTGTGAGGAATTTGTGTGAGTTAGCTAAAGGTGGAAGAACCGTCGTAATGACTATACATCAACCTTCTAGTAAACTCTTTCACATGTTTCAGAAGATTTTACTATTATCAGATGGTTATGGTATGTACTTTGGAAACGGAGATTATGTTCTGGAGTACTTCTCCGGTATCGGTTATGCTCCATTGGTTTCCATGAATCCTACAGATTTCTTACTTGATCTTGCAAATGGTATATATTCTGGAAATTCAGAAGAAGATATAGATAGTACAAAACAAGAATTAGTATCTGCTTTTGAGAGTAACCTTGCATACCAAGTAAAGACTGAACTTCAAAATTCAATGGTTTTATTTCATGATGATAGTTCAAAACATGAAATATTTGATTATTATTGCACAACTTGGTGGGAGCAGTTTACTATATTATTAAGAAGGGGTTTCAAAGAAAAAAAACATGAACAACTTTCTGTCCACAAAATCTGTCATGTTTTGGCATTATCATTCTCTGCAGGCCTTCTCTGGTGGCATTCTAATCCTGATCATATAAAAGACAAGGTAGGACTACTTTTCTACTATGCACAATTCTGTGGATTCATACCTATGGTTCAATCCCTCTTTACATTTCCCGAAGATCGCGCAATGATAATAAAAGAAAGGTCTTCATGCATGTACAGACTCTCATCATACTTCATAGCAAGTAATGTTATTGATCTTCCAGTGCAACTTTTCATGCCAACACTTTTTATCACAATTACTTATTGGATGGGAGGACTTAAAGCCAATGCTTCAAATTTCTTTCAAACACTAAGTGTCTCTCTTTTATATGCTTTGGTATCACAAAGTATTGGACAAGCTATTAGTGCAGTGCTGATAAATAATCCAAGGTTGGTTGTTACAGTTGGATCAGTGGTTATGACATTACTTGTTCTGACTAATGGATACTTTGTTCAAAATATGCCAGCATTTGTATCATGGATTAAGTACTTATCTCATAGCTATTATTACAATAAGCTCTTGCTAGGGTCACAGTTCAAGAATGATGACATTTATTCATGTGGTCAAAATGTTACTTGCTTAGTTGGAAACTATCCTACAATTAAGCATGTTGGTCTTGATAATCAAGGTCTGTCTGTTGCTGTCTTGGTGGCAATGCTTGTTGGCTATAGACTTATTGCCTATTTTGCCCTTATGGTTGGCATGACACAAGATTAA 1884 0.3562 MASEILNSAFQEMMQPVEAKSNIYMKVNSPVTLKFEDIVHKFKTSKREGLFFKKEINSEERLILKGISGIVFPGELLAILGPSGSGKSTLINALGGKLNDSNITKGTITYNGKPLSKSVKQNLGFVAQHDIFYPHLSVYETLVFSALLRLPNSLSKQEKISKVKEVIDELELNHCKDTIIGGPLLRGVSGGEMKRVSIGQELLTNPSLLLVDEATTGLDSTTARKLVRNLCELAKGGRTVVMTIHQPSSKLFHMFQKILLLSDGYGMYFGNGDYVLEYFSGIGYAPLVSMNPTDFLLDLANGIYSGNSEEDIDSTKQELVSAFESNLAYQVKTELQNSMVLFHDDSSKHEIFDYYCTTWWEQFTILLRRGFKEKKHEQLSVHKICHVLALSFSAGLLWWHSNPDHIKDKVGLLFYYAQFCGFIPMVQSLFTFPEDRAMIIKERSSCMYRLSSYFIASNVIDLPVQLFMPTLFITITYWMGGLKANASNFFQTLSVSLLYALVSQSIGQAISAVLINNPRLVVTVGSVVMTLLVLTNGYFVQNMPAFVSWIKYLSHSYYYNKLLLGSQFKNDDIYSCGQNVTCLVGNYPTIKHVGLDNQGLSVAVLVAMLVGYRLIAYFALMVGMTQD 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03630 627 Gene3D - 52 281 IPR027417 -
Trre8g03630 627 Pfam ABC-2 type transporter 245 342 IPR043926 GO:0140359
Trre8g03630 627 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524|GO:0016887
Trre8g03630 627 Pfam ABC transporter 64 215 IPR003439 GO:0005524
Trre8g03630 627 Pfam ABC-2 type transporter 361 568 IPR013525 GO:0016020|GO:0140359
Trre8g03630 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 288 IPR003439 GO:0005524
Trre8g03630 627 SMART AAA_5 73 266 IPR003593 GO:0016887
Trre8g03630 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 279 IPR027417 -
Trre8g03630 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03630 Trre-Chr8 40862678 40865694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03630 63 308 Calmodulin-binding Proteins AT2G36910 24.603 8.24e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03630 K05681 - gmx:100800295 893.264