Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03622 ATGGCGTATAGACGTTTCCTCTTGCAAAGAGGAAACAATCTCATAGATCGAAGATTCCACCCATCTTTCACCTATGTTCTCCACAACGATGAACCAAAACGTGACCAACCAGATGAAACAAAATCATCTTCAACAGAAATTAGTAACAGTTTTATTCAAAGAAGATCCTTTAGAAACTCTGTTAATGGATCAATAGGTTTTTTCTCATCTTCTCAGCATAGACAAAGCCTTTCTCCTTTTGCTGGATATAATTTGTGTAGAAATATGTCAACACTTGATCAGGCTGGTTCGGATAAGATTACCATAATGACTGATGTAGCTGATGTTCTTAAGGATTCGAGTTCGACGGTGGAAGCCGCTGTTTCTTCTCAGGGTCCTGTTGTTAGTGAAGTTGCTATTGCTGCTGCTGATTCTTATTTGCCTGTACAAGCCTTGCAGTATGTTATTGATGCTGTTCATTCCTACACCGGGCTAAATTGGTGGGCGGCTATAATTGTAACAACTCTCGTGATTCGAAGCGCAACTGTTCCACTCTTAATAAATCAACTCAAGGCCACTTCTAAGCTTACGCTAATGAGGCCTCGCTTGGAAGAGATAAAGGAAGAGATGGAGGGGAAGACAATGGATCCCGAGGCTGTTGCTGAAGGTCAGAAGAAGATGAATAAGCTATTCAAAGAATATGGCGTGAGTCCATTTACGCCATTGAAAGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTTGCGATAACAAACATGGCTGAAAAAATGCCATCATTCAAGCATGGTGGAGCTTTATGGTTTACTGATCTCTCAACTCCAGATGCCTTGTACATTTTTCCAGTTATAACTGCATTGTCATTCTTAGTAGTTGTAGAGTGTAATATGCAAGAAGGAATGGAAGGAAATCCCGTGGCTGGCACCATGAAAAATTTCTCAAGGGTTCTTGCTCTTCTTTCAGTTCCTTTCACCATGAGTTTTCCGAAGGCTATATTTTGTTACTGGGTTACATCAAATTTGTTTTCACTTTCGTATGGAATGGTGCTTAAAGTTCCTGGTGTTAAGAAAACTTTGGGCATTCCTGATTTACCTCCTCCAGAACCCAGCAGTTCTCCAAAAGCTCCCTTCTCTATATTGCAAGCAATAAAACAAGCTGCATCAGTGGCAAAGGGTGAGAGCTCAATGCCAGTAGAATCATCGAAACAACCAAATAAAAAGTTACCTTCGTCTTCTTCTGCCGTTATTAGTCAAAGGCTTAGAAGCTTAGAGAAAAAAGTAAAAGGAAGAAAGAAAAGCAAGAAGTTGTGA 1314 0.4011 MAYRRFLLQRGNNLIDRRFHPSFTYVLHNDEPKRDQPDETKSSSTEISNSFIQRRSFRNSVNGSIGFFSSSQHRQSLSPFAGYNLCRNMSTLDQAGSDKITIMTDVADVLKDSSSTVEAAVSSQGPVVSEVAIAAADSYLPVQALQYVIDAVHSYTGLNWWAAIIVTTLVIRSATVPLLINQLKATSKLTLMRPRLEEIKEEMEGKTMDPEAVAEGQKKMNKLFKEYGVSPFTPLKGLFIQGPVFISFFLAITNMAEKMPSFKHGGALWFTDLSTPDALYIFPVITALSFLVVVECNMQEGMEGNPVAGTMKNFSRVLALLSVPFTMSFPKAIFCYWVTSNLFSLSYGMVLKVPGVKKTLGIPDLPPPEPSSSPKAPFSILQAIKQAASVAKGESSMPVESSKQPNKKLPSSSSAVISQRLRSLEKKVKGRKKSKKL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03622 437 PANTHER OXA1 107 423 IPR001708 GO:0016020|GO:0032977
Trre8g03622 437 CDD 5TM_Oxa1-like 157 354 - -
Trre8g03622 437 Pfam 60Kd inner membrane protein 160 346 IPR028055 -
Trre8g03622 437 MobiDBLite consensus disorder prediction 395 418 - -
Trre8g03622 437 MobiDBLite consensus disorder prediction 389 418 - -
Trre8g03622 437 MobiDBLite consensus disorder prediction 28 47 - -
Trre8g03622 437 NCBIfam membrane protein insertase YidC 159 346 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03622 Trre-Chr8 40784553 40792486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03622 51 358 Chloroplast and Mitochondria Gene Families AT2G28800 24.290 3.14e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03622 K03217 - gmx:100787806 581.252