Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03610 ATGTCAACCTTTCTACAAAGTTCTCTTTCACAAGGAAACTTCTATTCATTATTCCCTATGCTTTTCTTTACTATCTTTCTACTATTCCTTTCTCTTTTCATCATCAAATGGCATTTCAATAATTCTTCTGTCAGAACAAAAAACTCGCCACCTTCACCTCCAAGATTACCTCTACTTGGTAATCTCCATCAACTTGGCTTATTCCCTCACCTATCACTCCAAAATTTTGCTCAAAAATATGGACCTCTAATGCTTCTTTATTTTGGAAAGGTTCCAGTCATTGTAGTTTCTTCTGCTGATGCAGCAAGTAAAGTAATGAAAACTCATGACTCCGTCTTCTGCGATAGGCCACATCGTAAAATCTTCGATATCCTTTTTTACTGTTCCAAAGATGTGGCAAGTTGTGGATATGGTGAGTATTGGAAACAAGTAAGGAGTCTCAGTGTGATAAACCTTTTGAGTAACAAAAGAGTTCAATCCTATCGCCGTGTTAGAGAGGAAGAAACTGCAAAAATGATGCAAAGCATCATTCAACAGAAGAATACTTCTGTGAATTTAACAGAGGTGTGTTCTACAATTACTAATGATGTAACATGCAGGGTGGTTCTAGGTAAAAGATATCGCGATGAAGGCGGAGTGTTGCCGGAGCTAATATTGGAGTTTGGAGAGTTATTGGTTGTTTTCTTTATAGGTGATTATATACCTTGGCTTAGTTGGTTGGGTAAGTTTAATGGTTTTTATAGCAAGGCAGAAAAAGTGGCCAAACATATGGATGAATTTTTTGACAAAGTTATTGAGGAGCATATCAATGGTAGTAGATTTGATGGCCATGTTGGTGAAGATAACAGTGATTTTGTGGACGTTTTGCTTTCAGTTCAAAAGAGCAATGATACTGGCTTCTCATTTGACAGAACTGCAATTAAGGGTTTGTTACTGGACATGTTTATTGCAGGTACCGACACTACCTACACAGTTCTAGAATGGACATTGACAGAACTGTTAAGACACAAAACTGTGATGCATAAATTGCAAGATGAGGTCAGAACTGTGGTTGGCAACCGAACTCATGTAACCGAGGAGCATTTGGTTAACATGACCTTCTTAAAGGCAGTGATCAAAGAAACTCTTCGTCTGCATATCCCGGTTCCCTTATTAGTCCCTCGGAGAACTATGGAAGATATCAAACTAGATGGCTATGACATTGCAGCTGGTTCACAGGTAATAGTGAATGCTTGGGCAATTGCAAGAGTAGACTCTTCAATTTGGGAAGAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTATAAAGGATTGGATTTTGAACTTATCCCATTTGGAGCAGGAAGGAGAGGTTGTCCTGGAGTGACTTTTGCTATTTCTATCAATGAATTGGTTTTAGCAAACCTTGTTAATCAATTTGATTGGAAATTGCCTGATGGAATAGAAGGAAAGGATTTGGACATGTCTGAAACTAATGGCCTTACTTGTCGTCGAAAATATCCTCTACTTGCAGTTGCTACCAAATATGACAGAAATGAATAA 1557 0.3789 MSTFLQSSLSQGNFYSLFPMLFFTIFLLFLSLFIIKWHFNNSSVRTKNSPPSPPRLPLLGNLHQLGLFPHLSLQNFAQKYGPLMLLYFGKVPVIVVSSADAASKVMKTHDSVFCDRPHRKIFDILFYCSKDVASCGYGEYWKQVRSLSVINLLSNKRVQSYRRVREEETAKMMQSIIQQKNTSVNLTEVCSTITNDVTCRVVLGKRYRDEGGVLPELILEFGELLVVFFIGDYIPWLSWLGKFNGFYSKAEKVAKHMDEFFDKVIEEHINGSRFDGHVGEDNSDFVDVLLSVQKSNDTGFSFDRTAIKGLLLDMFIAGTDTTYTVLEWTLTELLRHKTVMHKLQDEVRTVVGNRTHVTEEHLVNMTFLKAVIKETLRLHIPVPLLVPRRTMEDIKLDGYDIAAGSQVIVNAWAIARVDSSIWEEPLEFKPERFMNSSIDYKGLDFELIPFGAGRRGCPGVTFAISINELVLANLVNQFDWKLPDGIEGKDLDMSETNGLTCRRKYPLLAVATKYDRNE 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03610 518 Pfam Cytochrome P450 50 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 CDD CYP71-like 79 507 - -
Trre8g03610 518 Gene3D Cytochrome P450 35 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 SUPERFAMILY Cytochrome P450 50 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 FunFam Cytochrome P450 83B1 37 510 - -
Trre8g03610 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Trre8g03610 518 PANTHER CYTOCHROME P450 71B11-RELATED 30 512 - -
Trre8g03610 518 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03610 518 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03610 Trre-Chr8 40633085 40638586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03610 45 512 Cytochrome P450 AT3G48270 47.863 1.35e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03610 - - gmx:100819183 637.876