Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03608 ATGGTTTTCTTCACTATCTTCCCACTATTTCTTATTTCTCTTTTCTTCATCATCAAACATTGGTATTTCAACAATTCTTCTGTCACACGAAAAAACTCACCACCTTCACCTCCAAGATTCCCTCTACTTGGTAATCTCCATCAACTTGGCTTATTGCCACACCGGTCACTCCAAAATTTATCACACAAATATGGCCCTTTAATGCTTCTTTATTTTGGTAAGGTTCCAGTACTTGTGGTTTCCTCTGCTGATGCTGCGAGAAAAGTAATGAAAACTCATGACTTGGTTTTCTCTGATAGGCCACATAGTAAAATGTTTGATATCCTTTTATATGGTTCCAAAGATGTGGCAACTTGTGCATATGGCGACTATTGGAGACAAATAAAGAGTCTCAGTGTGTTACACCTTCTTAGTAACAAAAGGGTTCGATCTTATCGTCATGTGAGAGAGGAAGAAACTTTAAGAATGATGGAATATATTAAGAAGTGTTGTTCTTCTGCATCGCCGTTGAATTTAACTGAGTTGTGCTCTAAAATTACTAATGATATAATCTGTAGGGCGGCTTTTGGAAAAAGATACCGTGAAGGAAGAGGTGTGAAATTTCAGGAGGTGATGTCGGAGTTTGTGGAATTATTGGGTACTATATGTATTGGAGACTATATACCTTGGCTCGATTGGTTGGGGAAAGTTAATGGTTTTTATAGCAGGGCAAAAAAATGTGCCAAATATTTGGATGAGTTTATAGAACAAGTAATTGAGGAGCACATTAGTCATCATAGGTTCAGAAATGGCACCGTTGATAATGAGGAGCAGAGTGATTTTGTGGATGTTTTGCTTTCTGTTCAGAAGACTAATGCTATTGGCTTCCCAATTGATAGAACTGCAATCAAGGCTTTGATACTGGACATGTTTGCTGGAGGTACTGATACTACTTACACCGTCCTAGAATGGGCTATGACAGAACTGTTCAGACACGAAACTGTGATGCGTAAATTGCAAGATGAGGTGAGAACTGTGGTTGGCAACAGAACTCATGTAACTGAAGAGGATTTGGTTAAAATGAACTACTTGAAAGCTGTGATTAAAGAAACCCTTCGCCTCCACGTACCGATAACATTATTGGTCCCTCGGAAATCAATGGAAGATGTCAAACTAAATGGCTATGACATTGCAGCTGGAACACAGGTAATTATCAATGCATGGGCTATTGCAAGAGATCCTTCAAGTTGGGATGAACCTTTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTTCAAAGGATCGAATTTTGAACTTATCCCTTTTGGATCAGGAAGGAGGAGTTGTCCTGGAGTTTTGTTTGCCATTGCTGTGAATGAATTGGTGCTAGCAAACCTTGTTTACCAATTTGATTGGAAATTGCCTGATGTAGTAGCAGAGAAGGATTTGGATATGTCTGAGAGTGTTGGCATAACCTGTCATAGAAAATACCCTCTCTTTGCAGTAGCCAACACATATGAGAAAATTTAA 1518 0.386 MVFFTIFPLFLISLFFIIKHWYFNNSSVTRKNSPPSPPRFPLLGNLHQLGLLPHRSLQNLSHKYGPLMLLYFGKVPVLVVSSADAARKVMKTHDLVFSDRPHSKMFDILLYGSKDVATCAYGDYWRQIKSLSVLHLLSNKRVRSYRHVREEETLRMMEYIKKCCSSASPLNLTELCSKITNDIICRAAFGKRYREGRGVKFQEVMSEFVELLGTICIGDYIPWLDWLGKVNGFYSRAKKCAKYLDEFIEQVIEEHISHHRFRNGTVDNEEQSDFVDVLLSVQKTNAIGFPIDRTAIKALILDMFAGGTDTTYTVLEWAMTELFRHETVMRKLQDEVRTVVGNRTHVTEEDLVKMNYLKAVIKETLRLHVPITLLVPRKSMEDVKLNGYDIAAGTQVIINAWAIARDPSSWDEPLEFKPERFMNSSIDFKGSNFELIPFGSGRRSCPGVLFAIAVNELVLANLVYQFDWKLPDVVAEKDLDMSESVGITCHRKYPLFAVANTYEKI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03608 505 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PANTHER CYTOCHROME P450 71B11-RELATED 17 499 - -
Trre8g03608 505 SUPERFAMILY Cytochrome P450 34 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 Gene3D Cytochrome P450 21 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03608 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Trre8g03608 505 FunFam Cytochrome P450 83B1 21 498 - -
Trre8g03608 505 CDD CYP71-like 63 495 - -
Trre8g03608 505 Pfam Cytochrome P450 34 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03608 Trre-Chr8 40623442 40625780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03608 30 501 Cytochrome P450 AT3G48270 52.008 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03608 - - gmx:100819183 687.567