Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03607 ATGGTTTTCTTCACTATCTTCCCACTATTTCTTATTTCTCTTTTCTTCATCATCAAACATTGGTATTTCGACAATTCTTCTGTCACACGAGAAAACTCACCACCTTCACCTCCAAGATTGCCTCTACTTGGTAATCTCCATCAACTTGGCTTATTGCCACACTGGTCACTCCAAAATTTATCACACAAATATGGCCCTTTAATGCTTCTTTATTTTGGTAAGGTTCCAGTACTTGTGGTTTCCTCTGCTGATGCTGCGAGAAAAGTAATGAAAACTCATGACTTGGTTTTCTCTGATAGGCCACATAGTAAAATGCTTGATATCCTTTTATATGGTTCCAAAGATGTGGCAAGTTGTGCATATGGTGAGTATTGGAGACAAATAAAGAGTCTCAGTGTGTTACACCTTCTGAGTAACAAAAGGGTTCGATCTTATCACCGTGTAAGAGAGGAAGAAACTTTGAGAATGATGGAATATATTAAGGAGTGTTGTTCTTCTGCATCGCCGTTGAATTTAACTGAGTTGTGTTCTACAATTACTAATGATATAGTCTGTAGGGTGGCTTTAGGAAGAAGATACCGTGAAGGAAAAGGGAACAAATTTCAGGAAGTTTTGTCGGAGTTTGGGGAGTTATTGGGCACTGTATGTATAGGAGACTATATACCTTGGCTTGATTGGTTGGCGAAAGTTAATGGTATTTATAGAAGGGCAGAAAAATGTGCCAAATATTTGGATGAGTTTATAGAACAAGTTATTGAGGAGCACATTAGTCGTTGGTCTGATGGAGATGTTAGTGTCGATAGTGAGGATCAGAATGATTTTGTGGATGTTTTGCTTTCTATTCAAAAGACTAATGCTATTGGCTTCCCAATTGAGAGAACTTCAATAAAAGCTTTAATACTAGACATGTTTGCTGCAGGAAGAAGGGGTTGTCCTGGAGTATTGTTTGCTATTTCTGTGAATGAATTGGTGCTAGCAAACCTTGTTTACAAATTTGATTGGAAATTGCCTGATGGAATAGCAGGGAAGGATTTGGACATGTCTGAGACTGGTGGCCTTACTTGTCATAGAAAAGACCCTCTACTTGCTGTAGCTACAAAATATGACAGAAATGAATAA 1119 0.3816 MVFFTIFPLFLISLFFIIKHWYFDNSSVTRENSPPSPPRLPLLGNLHQLGLLPHWSLQNLSHKYGPLMLLYFGKVPVLVVSSADAARKVMKTHDLVFSDRPHSKMLDILLYGSKDVASCAYGEYWRQIKSLSVLHLLSNKRVRSYHRVREEETLRMMEYIKECCSSASPLNLTELCSTITNDIVCRVALGRRYREGKGNKFQEVLSEFGELLGTVCIGDYIPWLDWLAKVNGIYRRAEKCAKYLDEFIEQVIEEHISRWSDGDVSVDSEDQNDFVDVLLSIQKTNAIGFPIERTSIKALILDMFAAGRRGCPGVLFAISVNELVLANLVYKFDWKLPDGIAGKDLDMSETGGLTCHRKDPLLAVATKYDRNE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03607 372 Gene3D Cytochrome P450 306 370 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03607 372 Gene3D Cytochrome P450 22 305 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03607 372 Pfam Cytochrome P450 34 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03607 372 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03607 372 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03607 372 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03607 372 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03607 372 SUPERFAMILY Cytochrome P450 30 366 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03607 372 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 309 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03607 Trre-Chr8 40618841 40621355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03607 304 366 Cytochrome P450 AT3G48300 44.444 4.49e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03607 - - gmx:100819183 391.349